Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 SNORA2.3-201ENST00000383920 135 ntBASIC4.61□□□□□ -1.67
LTBQ06643 Y_RNA.436-201ENST00000384097 102 ntBASIC4.61□□□□□ -1.67
LTBQ06643 MIR137-201ENST00000385223 102 ntBASIC4.61□□□□□ -1.67
LTBQ06643 AL356131.1-201ENST00000405826 414 ntBASIC4.61□□□□□ -1.67
LTBQ06643 RPL26P37-201ENST00000411983 438 ntBASIC4.61□□□□□ -1.67
LTBQ06643 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.61□□□□□ -1.67
LTBQ06643 AL590139.1-201ENST00000416267 400 ntBASIC4.61□□□□□ -1.67
LTBQ06643 BTF3P9-201ENST00000418784 283 ntBASIC4.61□□□□□ -1.67
LTBQ06643 EIF4A1P1-201ENST00000420241 934 ntBASIC4.61□□□□□ -1.67
LTBQ06643 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.61□□□□□ -1.67
LTBQ06643 AL589823.1-201ENST00000429577 183 ntBASIC4.61□□□□□ -1.67
LTBQ06643 MTND1P20-201ENST00000430341 950 ntBASIC4.61□□□□□ -1.67
LTBQ06643 AC005189.1-201ENST00000431286 310 ntBASIC4.61□□□□□ -1.67
LTBQ06643 BX323845.1-201ENST00000432417 179 ntBASIC4.61□□□□□ -1.67
LTBQ06643 FTLP19-201ENST00000433300 394 ntBASIC4.61□□□□□ -1.67
LTBQ06643 MTCO3P5-201ENST00000433620 714 ntBASIC4.61□□□□□ -1.67
LTBQ06643 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LTBQ06643 NANOGP2-201ENST00000435391 727 ntBASIC4.61□□□□□ -1.67
LTBQ06643 EEF1A1P39-201ENST00000440791 250 ntBASIC4.61□□□□□ -1.67
LTBQ06643 AC011753.3-201ENST00000443436 406 ntBASIC4.61□□□□□ -1.67
LTBQ06643 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.61□□□□□ -1.67
LTBQ06643 MTND2P28-201ENST00000457540 1044 ntBASIC4.61□□□□□ -1.67
LTBQ06643 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.61□□□□□ -1.67
LTBQ06643 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.61□□□□□ -1.67
LTBQ06643 OR2A20P-203ENST00000498397 1268 ntBASIC4.61□□□□□ -1.67
LTBQ06643 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.61□□□□□ -1.67
LTBQ06643 MRPS33P3-201ENST00000513456 322 ntBASIC4.61□□□□□ -1.67
LTBQ06643 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.61□□□□□ -1.67
LTBQ06643 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.61□□□□□ -1.67
LTBQ06643 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.61□□□□□ -1.67
LTBQ06643 AP000926.4-201ENST00000527351 454 ntBASIC4.61□□□□□ -1.67
LTBQ06643 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LTBQ06643 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.61□□□□□ -1.67
LTBQ06643 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.61□□□□□ -1.67
LTBQ06643 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.61□□□□□ -1.67
LTBQ06643 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.61□□□□□ -1.67
LTBQ06643 AC121247.2-201ENST00000604776 136 ntBASIC4.61□□□□□ -1.67
LTBQ06643 AC005377.1-201ENST00000605126 456 ntBASIC4.61□□□□□ -1.67
LTBQ06643 AC018695.5-201ENST00000605872 315 ntBASIC4.61□□□□□ -1.67
LTBQ06643 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.61□□□□□ -1.67
LTBQ06643 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.61□□□□□ -1.67
LTBQ06643 AL392048.1-201ENST00000613946 534 ntBASIC4.61□□□□□ -1.67
LTBQ06643 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.61□□□□□ -1.67
LTBQ06643 AC010975.3-201ENST00000618727 978 ntBASIC4.61□□□□□ -1.67
LTBQ06643 MIR6758-201ENST00000620653 63 ntBASIC4.61□□□□□ -1.67
LTBQ06643 AC131159.1-201ENST00000621854 213 ntBASIC4.61□□□□□ -1.67
LTBQ06643 AC015660.5-201ENST00000623238 564 ntBASIC4.61□□□□□ -1.67
LTBQ06643 AP000648.2-201ENST00000624182 404 ntBASIC4.61□□□□□ -1.67
LTBQ06643 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.61□□□□□ -1.67
LTBQ06643 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
LTBQ06643 LINC02211-204ENST00000642024 1070 ntBASIC4.61□□□□□ -1.67
LTBQ06643 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LTBQ06643 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LTBQ06643 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LTBQ06643 AC125336.1-201ENST00000508893 2827 ntBASIC4.61□□□□□ -1.67
LTBQ06643 AC104454.1-201ENST00000421341 1401 ntBASIC4.61□□□□□ -1.67
LTBQ06643 AC021755.1-201ENST00000559747 1447 ntBASIC4.61□□□□□ -1.67
LTBQ06643 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
LTBQ06643 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
LTBQ06643 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.61□□□□□ -1.67
LTBQ06643 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LTBQ06643 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.61□□□□□ -1.67
LTBQ06643 AC132825.1-201ENST00000463573 2247 ntBASIC4.61□□□□□ -1.67
LTBQ06643 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
LTBQ06643 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.61□□□□□ -1.67
LTBQ06643 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LTBQ06643 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.61□□□□□ -1.67
LTBQ06643 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LTBQ06643 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LTBQ06643 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LTBQ06643 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
LTBQ06643 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
LTBQ06643 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
LTBQ06643 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.6□□□□□ -1.67
LTBQ06643 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.6□□□□□ -1.67
LTBQ06643 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LTBQ06643 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LTBQ06643 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LTBQ06643 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
LTBQ06643 RNA5SP123-201ENST00000363244 119 ntBASIC4.6□□□□□ -1.67
LTBQ06643 RNU4-92P-201ENST00000363783 136 ntBASIC4.6□□□□□ -1.67
LTBQ06643 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.6□□□□□ -1.67
LTBQ06643 RNU6-729P-201ENST00000384399 107 ntBASIC4.6□□□□□ -1.67
LTBQ06643 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
LTBQ06643 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.6□□□□□ -1.67
LTBQ06643 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.6□□□□□ -1.67
LTBQ06643 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.6□□□□□ -1.67
LTBQ06643 AL356320.2-201ENST00000417263 507 ntBASIC4.6□□□□□ -1.67
LTBQ06643 AC012519.1-201ENST00000424588 610 ntBASIC4.6□□□□□ -1.67
LTBQ06643 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.6□□□□□ -1.67
LTBQ06643 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.6□□□□□ -1.67
LTBQ06643 COX6CP13-201ENST00000428703 226 ntBASIC4.6□□□□□ -1.67
LTBQ06643 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.6□□□□□ -1.67
LTBQ06643 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.6□□□□□ -1.67
LTBQ06643 NDUFA5P10-201ENST00000432147 357 ntBASIC4.6□□□□□ -1.67
LTBQ06643 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.6□□□□□ -1.67
LTBQ06643 AC068135.1-201ENST00000446164 246 ntBASIC4.6□□□□□ -1.67
LTBQ06643 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.6□□□□□ -1.67
LTBQ06643 PTENP1-201ENST00000447117 1215 ntBASIC4.6□□□□□ -1.67
LTBQ06643 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms