Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 RNU11-4P-201ENST00000391149 133 ntBASIC4.95□□□□□ -1.62
GABPAQ06546 RPL17P36-201ENST00000420302 549 ntBASIC4.95□□□□□ -1.62
GABPAQ06546 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.95□□□□□ -1.62
GABPAQ06546 HSPE1P16-201ENST00000426640 348 ntBASIC4.95□□□□□ -1.62
GABPAQ06546 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.95□□□□□ -1.62
GABPAQ06546 TRIM60P13-201ENST00000432350 1283 ntBASIC4.95□□□□□ -1.62
GABPAQ06546 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.95□□□□□ -1.62
GABPAQ06546 RPL21P89-201ENST00000444021 467 ntBASIC4.95□□□□□ -1.62
GABPAQ06546 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.95□□□□□ -1.62
GABPAQ06546 AC104629.2-201ENST00000468627 598 ntBASIC4.95□□□□□ -1.62
GABPAQ06546 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.95□□□□□ -1.62
GABPAQ06546 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.95□□□□□ -1.62
GABPAQ06546 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC4.95□□□□□ -1.62
GABPAQ06546 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.95□□□□□ -1.62
GABPAQ06546 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.95□□□□□ -1.62
GABPAQ06546 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.95□□□□□ -1.62
GABPAQ06546 AC026616.1-201ENST00000523157 525 ntBASIC4.95□□□□□ -1.62
GABPAQ06546 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.95□□□□□ -1.62
GABPAQ06546 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.95□□□□□ -1.62
GABPAQ06546 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.95□□□□□ -1.62
GABPAQ06546 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.95□□□□□ -1.62
GABPAQ06546 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
GABPAQ06546 AC022655.2-201ENST00000577280 318 ntBASIC4.95□□□□□ -1.62
GABPAQ06546 AC093227.2-201ENST00000589357 285 ntBASIC4.95□□□□□ -1.62
GABPAQ06546 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
GABPAQ06546 KATNBL1P1-201ENST00000605192 748 ntBASIC4.95□□□□□ -1.62
GABPAQ06546 BNIP3P41-202ENST00000616656 861 ntBASIC4.95□□□□□ -1.62
GABPAQ06546 RMST_5.1-201ENST00000618704 126 ntBASIC4.95□□□□□ -1.62
GABPAQ06546 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
GABPAQ06546 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
GABPAQ06546 RLIMP1-201ENST00000339626 1680 ntBASIC4.95□□□□□ -1.62
GABPAQ06546 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.95□□□□□ -1.62
GABPAQ06546 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
GABPAQ06546 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
GABPAQ06546 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
GABPAQ06546 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
GABPAQ06546 IQCB2P-201ENST00000401788 1633 ntBASIC4.94□□□□□ -1.62
GABPAQ06546 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
GABPAQ06546 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.94□□□□□ -1.62
GABPAQ06546 TPT1P2-201ENST00000413105 503 ntBASIC4.94□□□□□ -1.62
GABPAQ06546 AL356806.1-201ENST00000422524 916 ntBASIC4.94□□□□□ -1.62
GABPAQ06546 RNF19BPX-201ENST00000426224 625 ntBASIC4.94□□□□□ -1.62
GABPAQ06546 ARL5AP3-201ENST00000439327 386 ntBASIC4.94□□□□□ -1.62
GABPAQ06546 AC122718.1-201ENST00000439448 744 ntBASIC4.94□□□□□ -1.62
GABPAQ06546 AC006326.1-201ENST00000445465 787 ntBASIC4.94□□□□□ -1.62
GABPAQ06546 FAM133DP-201ENST00000464802 691 ntBASIC4.94□□□□□ -1.62
GABPAQ06546 AF213884.1-201ENST00000488102 463 ntBASIC4.94□□□□□ -1.62
GABPAQ06546 RN7SL604P-201ENST00000492589 296 ntBASIC4.94□□□□□ -1.62
GABPAQ06546 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.94□□□□□ -1.62
GABPAQ06546 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
GABPAQ06546 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.94□□□□□ -1.62
GABPAQ06546 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.94□□□□□ -1.62
GABPAQ06546 AC008759.1-201ENST00000589783 983 ntBASIC4.94□□□□□ -1.62
GABPAQ06546 AL020997.2-201ENST00000602607 184 ntBASIC4.94□□□□□ -1.62
GABPAQ06546 AC084036.1-201ENST00000609190 508 ntBASIC4.94□□□□□ -1.62
GABPAQ06546 AC074140.1-201ENST00000621617 208 ntBASIC4.94□□□□□ -1.62
GABPAQ06546 MAPK10-320ENST00000641462 6696 ntBASIC4.94□□□□□ -1.62
GABPAQ06546 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
GABPAQ06546 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
GABPAQ06546 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.94□□□□□ -1.62
GABPAQ06546 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
GABPAQ06546 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
GABPAQ06546 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
GABPAQ06546 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
GABPAQ06546 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.93□□□□□ -1.62
GABPAQ06546 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
GABPAQ06546 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
GABPAQ06546 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
GABPAQ06546 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
GABPAQ06546 RNA5SP105-201ENST00000391123 113 ntBASIC4.93□□□□□ -1.62
GABPAQ06546 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.93□□□□□ -1.62
GABPAQ06546 AC115285.1-201ENST00000424879 736 ntBASIC4.93□□□□□ -1.62
GABPAQ06546 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.93□□□□□ -1.62
GABPAQ06546 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.93□□□□□ -1.62
GABPAQ06546 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.93□□□□□ -1.62
GABPAQ06546 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.93□□□□□ -1.62
GABPAQ06546 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
GABPAQ06546 CCRL1P1-201ENST00000449542 1053 ntBASIC4.93□□□□□ -1.62
GABPAQ06546 RPS29P19-201ENST00000479709 171 ntBASIC4.93□□□□□ -1.62
GABPAQ06546 AC108145.1-201ENST00000503770 153 ntBASIC4.93□□□□□ -1.62
GABPAQ06546 PCNAP1-201ENST00000505363 709 ntBASIC4.93□□□□□ -1.62
GABPAQ06546 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
GABPAQ06546 AC134698.5-201ENST00000519444 336 ntBASIC4.93□□□□□ -1.62
GABPAQ06546 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.93□□□□□ -1.62
GABPAQ06546 RPL21P7-201ENST00000557463 483 ntBASIC4.93□□□□□ -1.62
GABPAQ06546 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.93□□□□□ -1.62
GABPAQ06546 SLC25A36P1-201ENST00000590111 465 ntBASIC4.93□□□□□ -1.62
GABPAQ06546 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.93□□□□□ -1.62
GABPAQ06546 RNU4-89P-201ENST00000607443 133 ntBASIC4.93□□□□□ -1.62
GABPAQ06546 AC012467.1-201ENST00000607740 256 ntBASIC4.93□□□□□ -1.62
GABPAQ06546 AL118556.2-201ENST00000614375 824 ntBASIC4.93□□□□□ -1.62
GABPAQ06546 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.93□□□□□ -1.62
GABPAQ06546 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
GABPAQ06546 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
GABPAQ06546 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
GABPAQ06546 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
GABPAQ06546 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.92□□□□□ -1.62
GABPAQ06546 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
GABPAQ06546 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
GABPAQ06546 MAPK10-303ENST00000641324 3959 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms