Protein–RNA interactions for Protein: P63316

TNNC1, Troponin C, slow skeletal and cardiac muscles, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNC1P63316 AL445363.3-201ENST00000623080 671 ntBASIC4.59□□□□□ -1.67
TNNC1P63316 AC068254.2-201ENST00000623938 3577 ntBASIC4.59□□□□□ -1.67
TNNC1P63316 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
TNNC1P63316 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
TNNC1P63316 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TNNC1P63316 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.58□□□□□ -1.68
TNNC1P63316 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TNNC1P63316 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.58□□□□□ -1.68
TNNC1P63316 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.58□□□□□ -1.68
TNNC1P63316 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.58□□□□□ -1.68
TNNC1P63316 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
TNNC1P63316 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TNNC1P63316 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.58□□□□□ -1.68
TNNC1P63316 MIR383-201ENST00000362257 73 ntBASIC4.58□□□□□ -1.68
TNNC1P63316 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.58□□□□□ -1.68
TNNC1P63316 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TNNC1P63316 SNORD66.1-201ENST00000391230 76 ntBASIC4.58□□□□□ -1.68
TNNC1P63316 AL049693.1-201ENST00000402760 611 ntBASIC4.58□□□□□ -1.68
TNNC1P63316 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.58□□□□□ -1.68
TNNC1P63316 RN7SKP235-201ENST00000410662 305 ntBASIC4.58□□□□□ -1.68
TNNC1P63316 RNA5SP39-201ENST00000411245 120 ntBASIC4.58□□□□□ -1.68
TNNC1P63316 AL161631.1-201ENST00000417933 486 ntBASIC4.58□□□□□ -1.68
TNNC1P63316 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.58□□□□□ -1.68
TNNC1P63316 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.58□□□□□ -1.68
TNNC1P63316 RPL23AP38-201ENST00000423801 469 ntBASIC4.58□□□□□ -1.68
TNNC1P63316 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.58□□□□□ -1.68
TNNC1P63316 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.58□□□□□ -1.68
TNNC1P63316 AC099063.2-201ENST00000446360 662 ntBASIC4.58□□□□□ -1.68
TNNC1P63316 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.58□□□□□ -1.68
TNNC1P63316 AC243772.1-201ENST00000451620 410 ntBASIC4.58□□□□□ -1.68
TNNC1P63316 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.58□□□□□ -1.68
TNNC1P63316 AC041039.1-201ENST00000485656 536 ntBASIC4.58□□□□□ -1.68
TNNC1P63316 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.58□□□□□ -1.68
TNNC1P63316 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.58□□□□□ -1.68
TNNC1P63316 KCTD9P2-201ENST00000512203 1013 ntBASIC4.58□□□□□ -1.68
TNNC1P63316 AC092593.2-201ENST00000513866 913 ntBASIC4.58□□□□□ -1.68
TNNC1P63316 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.58□□□□□ -1.68
TNNC1P63316 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.58□□□□□ -1.68
TNNC1P63316 MIR3939-201ENST00000582614 106 ntBASIC4.58□□□□□ -1.68
TNNC1P63316 MIR3138-201ENST00000585238 82 ntBASIC4.58□□□□□ -1.68
TNNC1P63316 AC011477.5-201ENST00000586571 259 ntBASIC4.58□□□□□ -1.68
TNNC1P63316 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.58□□□□□ -1.68
TNNC1P63316 FAM27D1-201ENST00000612308 341 ntBASIC4.58□□□□□ -1.68
TNNC1P63316 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.58□□□□□ -1.68
TNNC1P63316 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TNNC1P63316 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.58□□□□□ -1.68
TNNC1P63316 AC233309.1-201ENST00000619522 751 ntBASIC4.58□□□□□ -1.68
TNNC1P63316 AC103858.2-201ENST00000621471 543 ntBASIC4.58□□□□□ -1.68
TNNC1P63316 MIR3653-201ENST00000625572 110 ntBASIC4.58□□□□□ -1.68
TNNC1P63316 MIR6830-201ENST00000636015 70 ntBASIC4.58□□□□□ -1.68
TNNC1P63316 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TNNC1P63316 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.58□□□□□ -1.68
TNNC1P63316 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TNNC1P63316 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.58□□□□□ -1.68
TNNC1P63316 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TNNC1P63316 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TNNC1P63316 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.57□□□□□ -1.68
TNNC1P63316 AC005261.4-201ENST00000600047 1385 ntBASIC4.57□□□□□ -1.68
TNNC1P63316 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.57□□□□□ -1.68
TNNC1P63316 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
TNNC1P63316 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
TNNC1P63316 RNA5SP105-201ENST00000391123 113 ntBASIC4.57□□□□□ -1.68
TNNC1P63316 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TNNC1P63316 EIF4A1P3-201ENST00000411521 244 ntBASIC4.57□□□□□ -1.68
TNNC1P63316 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.57□□□□□ -1.68
TNNC1P63316 AC105137.1-201ENST00000484355 562 ntBASIC4.57□□□□□ -1.68
TNNC1P63316 AC091167.1-201ENST00000492017 396 ntBASIC4.57□□□□□ -1.68
TNNC1P63316 AC108145.1-201ENST00000503770 153 ntBASIC4.57□□□□□ -1.68
TNNC1P63316 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.57□□□□□ -1.68
TNNC1P63316 RN7SKP122-201ENST00000515923 296 ntBASIC4.57□□□□□ -1.68
TNNC1P63316 RNA5SP73-201ENST00000516744 108 ntBASIC4.57□□□□□ -1.68
TNNC1P63316 IGKV2D-10-201ENST00000520194 281 ntBASIC4.57□□□□□ -1.68
TNNC1P63316 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.57□□□□□ -1.68
TNNC1P63316 AC015922.4-201ENST00000612568 690 ntBASIC4.57□□□□□ -1.68
TNNC1P63316 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.57□□□□□ -1.68
TNNC1P63316 MIR4727-201ENST00000622232 55 ntBASIC4.57□□□□□ -1.68
TNNC1P63316 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.57□□□□□ -1.68
TNNC1P63316 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
TNNC1P63316 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
TNNC1P63316 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TNNC1P63316 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TNNC1P63316 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.57□□□□□ -1.68
TNNC1P63316 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
TNNC1P63316 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.56□□□□□ -1.68
TNNC1P63316 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TNNC1P63316 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TNNC1P63316 NCSTNP1-201ENST00000406229 144 ntBASIC4.56□□□□□ -1.68
TNNC1P63316 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.56□□□□□ -1.68
TNNC1P63316 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.56□□□□□ -1.68
TNNC1P63316 TRGV7-201ENST00000427089 353 ntBASIC4.56□□□□□ -1.68
TNNC1P63316 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.56□□□□□ -1.68
TNNC1P63316 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.56□□□□□ -1.68
TNNC1P63316 GSTA7P-201ENST00000438425 448 ntBASIC4.56□□□□□ -1.68
TNNC1P63316 RPL23AP46-201ENST00000438548 490 ntBASIC4.56□□□□□ -1.68
TNNC1P63316 EEF1A1P1-201ENST00000447052 739 ntBASIC4.56□□□□□ -1.68
TNNC1P63316 NUTF2P3-201ENST00000448540 384 ntBASIC4.56□□□□□ -1.68
TNNC1P63316 AC104306.1-201ENST00000449702 371 ntBASIC4.56□□□□□ -1.68
TNNC1P63316 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.56□□□□□ -1.68
TNNC1P63316 AC010618.1-201ENST00000469924 477 ntBASIC4.56□□□□□ -1.68
TNNC1P63316 RPS29P19-201ENST00000479709 171 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms