Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.18□□□□□ -1.74
CXCL12P48061 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CXCL12P48061 GTF3AP5-201ENST00000442645 697 ntBASIC4.18□□□□□ -1.74
CXCL12P48061 RPL7L1P1-201ENST00000448259 785 ntBASIC4.18□□□□□ -1.74
CXCL12P48061 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.18□□□□□ -1.74
CXCL12P48061 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.18□□□□□ -1.74
CXCL12P48061 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.18□□□□□ -1.74
CXCL12P48061 AC022616.2-201ENST00000523185 300 ntBASIC4.18□□□□□ -1.74
CXCL12P48061 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.18□□□□□ -1.74
CXCL12P48061 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.18□□□□□ -1.74
CXCL12P48061 AC084759.1-201ENST00000561168 290 ntBASIC4.18□□□□□ -1.74
CXCL12P48061 RN7SL339P-201ENST00000580597 296 ntBASIC4.18□□□□□ -1.74
CXCL12P48061 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.18□□□□□ -1.74
CXCL12P48061 AC012468.1-201ENST00000604888 430 ntBASIC4.18□□□□□ -1.74
CXCL12P48061 AC020978.9-201ENST00000624380 1141 ntBASIC4.18□□□□□ -1.74
CXCL12P48061 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CXCL12P48061 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CXCL12P48061 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CXCL12P48061 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
CXCL12P48061 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CXCL12P48061 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CXCL12P48061 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CXCL12P48061 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CXCL12P48061 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CXCL12P48061 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CXCL12P48061 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CXCL12P48061 MAPK10-303ENST00000641324 3959 ntBASIC4.17□□□□□ -1.74
CXCL12P48061 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CXCL12P48061 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CXCL12P48061 AC092376.2-201ENST00000622621 4116 ntBASIC4.17□□□□□ -1.74
CXCL12P48061 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.17□□□□□ -1.74
CXCL12P48061 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.17□□□□□ -1.74
CXCL12P48061 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.17□□□□□ -1.74
CXCL12P48061 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CXCL12P48061 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CXCL12P48061 RNU6-213P-201ENST00000384051 104 ntBASIC4.17□□□□□ -1.74
CXCL12P48061 MIR483-201ENST00000385070 76 ntBASIC4.17□□□□□ -1.74
CXCL12P48061 RN7SKP97-201ENST00000410966 333 ntBASIC4.17□□□□□ -1.74
CXCL12P48061 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.17□□□□□ -1.74
CXCL12P48061 RPEP2-201ENST00000432149 701 ntBASIC4.17□□□□□ -1.74
CXCL12P48061 RPS26P2-201ENST00000440331 348 ntBASIC4.17□□□□□ -1.74
CXCL12P48061 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.17□□□□□ -1.74
CXCL12P48061 RPS3AP12-201ENST00000443616 753 ntBASIC4.17□□□□□ -1.74
CXCL12P48061 RNU7-157P-201ENST00000459600 66 ntBASIC4.17□□□□□ -1.74
CXCL12P48061 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.17□□□□□ -1.74
CXCL12P48061 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CXCL12P48061 HMGB3P16-201ENST00000508037 287 ntBASIC4.17□□□□□ -1.74
CXCL12P48061 PGBD4P4-201ENST00000509673 613 ntBASIC4.17□□□□□ -1.74
CXCL12P48061 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.17□□□□□ -1.74
CXCL12P48061 RNA5SP230-201ENST00000517039 122 ntBASIC4.17□□□□□ -1.74
CXCL12P48061 RN7SKP5-201ENST00000517045 272 ntBASIC4.17□□□□□ -1.74
CXCL12P48061 DUXAP2-201ENST00000519198 589 ntBASIC4.17□□□□□ -1.74
CXCL12P48061 SRGNP1-201ENST00000603392 451 ntBASIC4.17□□□□□ -1.74
CXCL12P48061 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.17□□□□□ -1.74
CXCL12P48061 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.17□□□□□ -1.74
CXCL12P48061 AC012314.7-201ENST00000619693 93 ntBASIC4.17□□□□□ -1.74
CXCL12P48061 AC091953.5-201ENST00000622919 233 ntBASIC4.17□□□□□ -1.74
CXCL12P48061 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.17□□□□□ -1.74
CXCL12P48061 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.17□□□□□ -1.74
CXCL12P48061 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CXCL12P48061 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CXCL12P48061 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.17□□□□□ -1.74
CXCL12P48061 AC139713.2-215ENST00000641428 5037 ntBASIC4.17□□□□□ -1.74
CXCL12P48061 AC116667.1-201ENST00000604855 2072 ntBASIC4.17□□□□□ -1.74
CXCL12P48061 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
CXCL12P48061 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
CXCL12P48061 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.16□□□□□ -1.74
CXCL12P48061 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.16□□□□□ -1.74
CXCL12P48061 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CXCL12P48061 RNA5SP151-201ENST00000365632 117 ntBASIC4.16□□□□□ -1.74
CXCL12P48061 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
CXCL12P48061 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CXCL12P48061 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.16□□□□□ -1.74
CXCL12P48061 AC013268.2-201ENST00000420753 337 ntBASIC4.16□□□□□ -1.74
CXCL12P48061 OR5BE1P-201ENST00000425977 939 ntBASIC4.16□□□□□ -1.74
CXCL12P48061 AL121578.1-201ENST00000428051 892 ntBASIC4.16□□□□□ -1.74
CXCL12P48061 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.16□□□□□ -1.74
CXCL12P48061 OR9M1P-201ENST00000459641 921 ntBASIC4.16□□□□□ -1.74
CXCL12P48061 RPL7P1-201ENST00000468161 747 ntBASIC4.16□□□□□ -1.74
CXCL12P48061 RPL7P9-201ENST00000468715 747 ntBASIC4.16□□□□□ -1.74
CXCL12P48061 NPM1P29-201ENST00000483112 803 ntBASIC4.16□□□□□ -1.74
CXCL12P48061 RPS4XP15-201ENST00000489210 795 ntBASIC4.16□□□□□ -1.74
CXCL12P48061 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.16□□□□□ -1.74
CXCL12P48061 RNA5SP303-201ENST00000516192 130 ntBASIC4.16□□□□□ -1.74
CXCL12P48061 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.16□□□□□ -1.74
CXCL12P48061 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.16□□□□□ -1.74
CXCL12P48061 RPL23AP97-201ENST00000568955 471 ntBASIC4.16□□□□□ -1.74
CXCL12P48061 AC233702.9-201ENST00000581528 203 ntBASIC4.16□□□□□ -1.74
CXCL12P48061 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CXCL12P48061 AC007179.3-201ENST00000604976 235 ntBASIC4.16□□□□□ -1.74
CXCL12P48061 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CXCL12P48061 AC008833.1-201ENST00000611633 691 ntBASIC4.16□□□□□ -1.74
CXCL12P48061 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CXCL12P48061 AL391261.4-201ENST00000616012 481 ntBASIC4.16□□□□□ -1.74
CXCL12P48061 MIR7151-201ENST00000617477 60 ntBASIC4.16□□□□□ -1.74
CXCL12P48061 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.16□□□□□ -1.74
CXCL12P48061 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.16□□□□□ -1.74
CXCL12P48061 OR5BE1P-202ENST00000641168 1176 ntBASIC4.16□□□□□ -1.74
CXCL12P48061 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.16□□□□□ -1.74
CXCL12P48061 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms