Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.08□□□□□ -1.76
NKX2-1P43699 RNU6-416P-201ENST00000516265 103 ntBASIC4.08□□□□□ -1.76
NKX2-1P43699 RNA5SP373-201ENST00000517271 95 ntBASIC4.08□□□□□ -1.76
NKX2-1P43699 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.08□□□□□ -1.76
NKX2-1P43699 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.08□□□□□ -1.76
NKX2-1P43699 AC112191.2-201ENST00000522428 333 ntBASIC4.08□□□□□ -1.76
NKX2-1P43699 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.08□□□□□ -1.76
NKX2-1P43699 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.08□□□□□ -1.76
NKX2-1P43699 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.08□□□□□ -1.76
NKX2-1P43699 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.08□□□□□ -1.76
NKX2-1P43699 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NKX2-1P43699 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.08□□□□□ -1.76
NKX2-1P43699 MTCYBP23-201ENST00000558717 1102 ntBASIC4.08□□□□□ -1.76
NKX2-1P43699 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NKX2-1P43699 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NKX2-1P43699 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.08□□□□□ -1.76
NKX2-1P43699 AC015720.2-201ENST00000567709 334 ntBASIC4.08□□□□□ -1.76
NKX2-1P43699 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.08□□□□□ -1.76
NKX2-1P43699 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.08□□□□□ -1.76
NKX2-1P43699 AC022022.2-201ENST00000602989 360 ntBASIC4.08□□□□□ -1.76
NKX2-1P43699 AC093765.1-201ENST00000603758 881 ntBASIC4.08□□□□□ -1.76
NKX2-1P43699 AL392112.1-201ENST00000605115 829 ntBASIC4.08□□□□□ -1.76
NKX2-1P43699 AL355578.1-201ENST00000607405 1328 ntBASIC4.08□□□□□ -1.76
NKX2-1P43699 AC104118.1-201ENST00000607625 1589 ntBASIC4.08□□□□□ -1.76
NKX2-1P43699 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC4.08□□□□□ -1.76
NKX2-1P43699 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.08□□□□□ -1.76
NKX2-1P43699 AP004247.3-201ENST00000608682 624 ntBASIC4.08□□□□□ -1.76
NKX2-1P43699 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.08□□□□□ -1.76
NKX2-1P43699 AL121895.2-201ENST00000619558 447 ntBASIC4.08□□□□□ -1.76
NKX2-1P43699 AC127024.6-201ENST00000621598 424 ntBASIC4.08□□□□□ -1.76
NKX2-1P43699 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.08□□□□□ -1.76
NKX2-1P43699 AL691477.1-201ENST00000624398 162 ntBASIC4.08□□□□□ -1.76
NKX2-1P43699 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.08□□□□□ -1.76
NKX2-1P43699 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NKX2-1P43699 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NKX2-1P43699 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.08□□□□□ -1.76
NKX2-1P43699 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
NKX2-1P43699 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.08□□□□□ -1.76
NKX2-1P43699 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.07□□□□□ -1.76
NKX2-1P43699 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
NKX2-1P43699 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.07□□□□□ -1.76
NKX2-1P43699 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
NKX2-1P43699 AC138393.1-206ENST00000540997 1886 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
NKX2-1P43699 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
NKX2-1P43699 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NKX2-1P43699 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.07□□□□□ -1.76
NKX2-1P43699 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
NKX2-1P43699 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NKX2-1P43699 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
NKX2-1P43699 AC008549.2-201ENST00000333482 706 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NKX2-1P43699 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
NKX2-1P43699 TMSB4XP8-201ENST00000402089 135 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
NKX2-1P43699 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.07□□□□□ -1.76
NKX2-1P43699 EIF4A1P3-201ENST00000411521 244 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 OR51A3P-201ENST00000413596 924 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.07□□□□□ -1.76
NKX2-1P43699 AC107081.1-201ENST00000414975 361 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 TMSB4XP6-201ENST00000415187 135 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.07□□□□□ -1.76
NKX2-1P43699 RPL22P18-201ENST00000417197 377 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 AC027644.1-201ENST00000419595 298 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 MTCO2P21-201ENST00000419780 677 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
NKX2-1P43699 AL513175.2-201ENST00000422071 443 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 TMSB4XP1-201ENST00000424567 135 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.07□□□□□ -1.76
NKX2-1P43699 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.07□□□□□ -1.76
NKX2-1P43699 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.07□□□□□ -1.76
NKX2-1P43699 HMGB1P45-201ENST00000435986 653 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 SUMO2P3-201ENST00000438311 288 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 AC073052.1-201ENST00000440417 714 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.07□□□□□ -1.76
NKX2-1P43699 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
NKX2-1P43699 MTCYBP42-201ENST00000444653 1130 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.07□□□□□ -1.76
NKX2-1P43699 HMGN1P36-201ENST00000446623 298 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.07□□□□□ -1.76
NKX2-1P43699 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.07□□□□□ -1.76
NKX2-1P43699 ZNF886P-201ENST00000450781 723 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.07□□□□□ -1.76
NKX2-1P43699 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.07□□□□□ -1.76
NKX2-1P43699 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.07□□□□□ -1.76
NKX2-1P43699 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.07□□□□□ -1.76
NKX2-1P43699 AC079203.1-201ENST00000487972 404 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 RPL30P11-201ENST00000495304 339 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 ARL4AP1-201ENST00000503220 705 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.07□□□□□ -1.76
NKX2-1P43699 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.07□□□□□ -1.76
NKX2-1P43699 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NKX2-1P43699 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.07□□□□□ -1.76
NKX2-1P43699 AC023050.2-201ENST00000544968 387 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 AC090022.1-201ENST00000546569 311 ntBASIC4.07□□□□□ -1.76
NKX2-1P43699 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.07□□□□□ -1.76
NKX2-1P43699 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.07□□□□□ -1.76
NKX2-1P43699 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.07□□□□□ -1.76
NKX2-1P43699 CCDC58P3-201ENST00000590792 430 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms