Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.74□□□□□ -1.65
SSR1P43307 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
SSR1P43307 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
SSR1P43307 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SSR1P43307 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
SSR1P43307 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSR1P43307 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SSR1P43307 RNU1-44P-201ENST00000384453 163 ntBASIC4.73□□□□□ -1.65
SSR1P43307 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.73□□□□□ -1.65
SSR1P43307 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SSR1P43307 RPS20P14-201ENST00000412545 360 ntBASIC4.73□□□□□ -1.65
SSR1P43307 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.73□□□□□ -1.65
SSR1P43307 AC007064.3-201ENST00000422608 359 ntBASIC4.73□□□□□ -1.65
SSR1P43307 CEACAMP1-201ENST00000434624 1035 ntBASIC4.73□□□□□ -1.65
SSR1P43307 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.73□□□□□ -1.65
SSR1P43307 AC012671.1-201ENST00000451912 203 ntBASIC4.73□□□□□ -1.65
SSR1P43307 RPS27AP17-201ENST00000463344 455 ntBASIC4.73□□□□□ -1.65
SSR1P43307 RPL12P20-201ENST00000475538 479 ntBASIC4.73□□□□□ -1.65
SSR1P43307 AC011005.3-201ENST00000491624 395 ntBASIC4.73□□□□□ -1.65
SSR1P43307 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSR1P43307 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SSR1P43307 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.73□□□□□ -1.65
SSR1P43307 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SSR1P43307 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
SSR1P43307 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.73□□□□□ -1.65
SSR1P43307 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.73□□□□□ -1.65
SSR1P43307 AL161713.1-201ENST00000555538 145 ntBASIC4.73□□□□□ -1.65
SSR1P43307 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SSR1P43307 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.73□□□□□ -1.65
SSR1P43307 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.73□□□□□ -1.65
SSR1P43307 SLC25A36P1-201ENST00000590111 465 ntBASIC4.73□□□□□ -1.65
SSR1P43307 AC023762.1-201ENST00000603280 584 ntBASIC4.73□□□□□ -1.65
SSR1P43307 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.73□□□□□ -1.65
SSR1P43307 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SSR1P43307 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.73□□□□□ -1.65
SSR1P43307 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.73□□□□□ -1.65
SSR1P43307 OR5AC4P-202ENST00000642086 985 ntBASIC4.73□□□□□ -1.65
SSR1P43307 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.73□□□□□ -1.65
SSR1P43307 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
SSR1P43307 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
SSR1P43307 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSR1P43307 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.73□□□□□ -1.65
SSR1P43307 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.72□□□□□ -1.65
SSR1P43307 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSR1P43307 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SSR1P43307 RNU1-87P-201ENST00000363727 170 ntBASIC4.72□□□□□ -1.65
SSR1P43307 RN7SKP103-201ENST00000363848 320 ntBASIC4.72□□□□□ -1.65
SSR1P43307 RNA5SP151-201ENST00000365632 117 ntBASIC4.72□□□□□ -1.65
SSR1P43307 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SSR1P43307 AC006455.6-201ENST00000426192 893 ntBASIC4.72□□□□□ -1.65
SSR1P43307 RPL7P4-203ENST00000430239 730 ntBASIC4.72□□□□□ -1.65
SSR1P43307 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.72□□□□□ -1.65
SSR1P43307 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.72□□□□□ -1.65
SSR1P43307 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SSR1P43307 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SSR1P43307 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.72□□□□□ -1.65
SSR1P43307 AC092324.1-201ENST00000468671 324 ntBASIC4.72□□□□□ -1.65
SSR1P43307 AC022336.1-201ENST00000475510 337 ntBASIC4.72□□□□□ -1.65
SSR1P43307 PPIAP15-201ENST00000479662 484 ntBASIC4.72□□□□□ -1.65
SSR1P43307 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.72□□□□□ -1.65
SSR1P43307 AC012170.1-201ENST00000495139 359 ntBASIC4.72□□□□□ -1.65
SSR1P43307 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.72□□□□□ -1.65
SSR1P43307 KCTD9P2-201ENST00000512203 1013 ntBASIC4.72□□□□□ -1.65
SSR1P43307 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.72□□□□□ -1.65
SSR1P43307 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.72□□□□□ -1.65
SSR1P43307 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.72□□□□□ -1.65
SSR1P43307 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.72□□□□□ -1.65
SSR1P43307 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.72□□□□□ -1.65
SSR1P43307 FAM60CP-201ENST00000591086 664 ntBASIC4.72□□□□□ -1.65
SSR1P43307 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SSR1P43307 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.72□□□□□ -1.65
SSR1P43307 AL021707.7-201ENST00000607991 416 ntBASIC4.72□□□□□ -1.65
SSR1P43307 AL592494.3-201ENST00000609485 464 ntBASIC4.72□□□□□ -1.65
SSR1P43307 AC012531.5-201ENST00000611375 151 ntBASIC4.72□□□□□ -1.65
SSR1P43307 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSR1P43307 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
SSR1P43307 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SSR1P43307 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSR1P43307 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSR1P43307 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSR1P43307 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSR1P43307 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
SSR1P43307 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.71□□□□□ -1.66
SSR1P43307 RPL31P52-201ENST00000407532 367 ntBASIC4.71□□□□□ -1.66
SSR1P43307 GSTM3P2-201ENST00000412746 530 ntBASIC4.71□□□□□ -1.66
SSR1P43307 SNRPFP1-201ENST00000414761 252 ntBASIC4.71□□□□□ -1.66
SSR1P43307 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SSR1P43307 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.71□□□□□ -1.66
SSR1P43307 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.71□□□□□ -1.66
SSR1P43307 FCF1P7-201ENST00000451185 558 ntBASIC4.71□□□□□ -1.66
SSR1P43307 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.71□□□□□ -1.66
SSR1P43307 RN7SL481P-201ENST00000477764 299 ntBASIC4.71□□□□□ -1.66
SSR1P43307 AP001086.1-201ENST00000494882 321 ntBASIC4.71□□□□□ -1.66
SSR1P43307 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
SSR1P43307 TRAV31-201ENST00000502780 342 ntBASIC4.71□□□□□ -1.66
SSR1P43307 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SSR1P43307 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.71□□□□□ -1.66
SSR1P43307 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.71□□□□□ -1.66
SSR1P43307 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.71□□□□□ -1.66
SSR1P43307 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms