Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HTTP42858 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC4.24□□□□□ -1.73
HTTP42858 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HTTP42858 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.24□□□□□ -1.73
HTTP42858 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.24□□□□□ -1.73
HTTP42858 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.24□□□□□ -1.73
HTTP42858 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC4.24□□□□□ -1.73
HTTP42858 AC005086.4-201ENST00000623065 213 ntBASIC4.24□□□□□ -1.73
HTTP42858 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
HTTP42858 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC4.24□□□□□ -1.73
HTTP42858 LINC00561-201ENST00000565815 2738 ntBASIC4.24□□□□□ -1.73
HTTP42858 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.24□□□□□ -1.73
HTTP42858 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.24□□□□□ -1.73
HTTP42858 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.24□□□□□ -1.73
HTTP42858 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.24□□□□□ -1.73
HTTP42858 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
HTTP42858 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
HTTP42858 SNORA38.1-201ENST00000364172 131 ntBASIC4.23□□□□□ -1.73
HTTP42858 AC017079.2-201ENST00000416102 485 ntBASIC4.23□□□□□ -1.73
HTTP42858 UBE2V1P1-201ENST00000430836 445 ntBASIC4.23□□□□□ -1.73
HTTP42858 RAC1P2-201ENST00000511164 579 ntBASIC4.23□□□□□ -1.73
HTTP42858 Vault.1-201ENST00000516474 102 ntBASIC4.23□□□□□ -1.73
HTTP42858 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.23□□□□□ -1.73
HTTP42858 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HTTP42858 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC4.23□□□□□ -1.73
HTTP42858 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
HTTP42858 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HTTP42858 SNX18P3-202ENST00000565670 1750 ntBASIC4.23□□□□□ -1.73
HTTP42858 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HTTP42858 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.23□□□□□ -1.73
HTTP42858 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
HTTP42858 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
HTTP42858 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
HTTP42858 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HTTP42858 AL445433.1-201ENST00000457507 257 ntBASIC4.23□□□□□ -1.73
HTTP42858 AC069306.1-201ENST00000507006 843 ntBASIC4.23□□□□□ -1.73
HTTP42858 AC118465.1-201ENST00000513820 1271 ntBASIC4.23□□□□□ -1.73
HTTP42858 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.23□□□□□ -1.73
HTTP42858 AC009303.3-201ENST00000591103 736 ntBASIC4.23□□□□□ -1.73
HTTP42858 AL713922.2-201ENST00000619384 716 ntBASIC4.23□□□□□ -1.73
HTTP42858 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HTTP42858 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.23□□□□□ -1.73
HTTP42858 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HTTP42858 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HTTP42858 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
HTTP42858 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
HTTP42858 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HTTP42858 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HTTP42858 FAM26E-201ENST00000368599 9784 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HTTP42858 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
HTTP42858 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.22□□□□□ -1.73
HTTP42858 AC084198.1-201ENST00000477747 402 ntBASIC4.22□□□□□ -1.73
HTTP42858 IGHV3-32-201ENST00000519182 355 ntBASIC4.22□□□□□ -1.73
HTTP42858 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HTTP42858 OR7E13P-201ENST00000526052 910 ntBASIC4.22□□□□□ -1.73
HTTP42858 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HTTP42858 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HTTP42858 AC124312.6-202ENST00000623624 418 ntBASIC4.22□□□□□ -1.73
HTTP42858 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
HTTP42858 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HTTP42858 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HTTP42858 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.22□□□□□ -1.73
HTTP42858 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
HTTP42858 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC4.22□□□□□ -1.73
HTTP42858 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HTTP42858 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HTTP42858 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.22□□□□□ -1.73
HTTP42858 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.22□□□□□ -1.73
HTTP42858 AC005019.1-201ENST00000436455 431 ntBASIC4.22□□□□□ -1.73
HTTP42858 AL671855.1-201ENST00000446875 1203 ntBASIC4.22□□□□□ -1.73
HTTP42858 AC006517.1-201ENST00000480485 328 ntBASIC4.22□□□□□ -1.73
HTTP42858 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.22□□□□□ -1.73
HTTP42858 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HTTP42858 AC063950.1-201ENST00000552036 308 ntBASIC4.22□□□□□ -1.73
HTTP42858 MIR4433B-201ENST00000581329 102 ntBASIC4.22□□□□□ -1.73
HTTP42858 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
HTTP42858 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.22□□□□□ -1.73
HTTP42858 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.22□□□□□ -1.73
HTTP42858 HMGB1P37-201ENST00000439613 609 ntBASIC4.21□□□□□ -1.73
HTTP42858 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.21□□□□□ -1.73
HTTP42858 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
HTTP42858 AC011825.1-201ENST00000484967 388 ntBASIC4.21□□□□□ -1.73
HTTP42858 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.21□□□□□ -1.73
HTTP42858 Y_RNA.673-201ENST00000516306 88 ntBASIC4.21□□□□□ -1.73
HTTP42858 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.21□□□□□ -1.73
HTTP42858 AC138932.5-201ENST00000617759 563 ntBASIC4.21□□□□□ -1.73
HTTP42858 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.73
HTTP42858 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
HTTP42858 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.21□□□□□ -1.73
HTTP42858 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.21□□□□□ -1.73
HTTP42858 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HTTP42858 AC107398.3-201ENST00000562284 7000 ntBASIC4.21□□□□□ -1.74
HTTP42858 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HTTP42858 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
HTTP42858 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.21□□□□□ -1.74
HTTP42858 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC4.21□□□□□ -1.74
HTTP42858 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.21□□□□□ -1.74
HTTP42858 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
HTTP42858 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HTTP42858 SNORD17-201ENST00000390930 237 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms