Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
RORAP35398 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
RORAP35398 RNU1-130P-201ENST00000363930 160 ntBASIC4.26□□□□□ -1.73
RORAP35398 RNU6-670P-201ENST00000364312 104 ntBASIC4.26□□□□□ -1.73
RORAP35398 MIR921-201ENST00000401133 56 ntBASIC4.26□□□□□ -1.73
RORAP35398 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
RORAP35398 HDGFP1-201ENST00000405943 252 ntBASIC4.26□□□□□ -1.73
RORAP35398 RPL23AP48-201ENST00000406913 488 ntBASIC4.26□□□□□ -1.73
RORAP35398 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.26□□□□□ -1.73
RORAP35398 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RORAP35398 PDSS1P1-201ENST00000422953 1114 ntBASIC4.26□□□□□ -1.73
RORAP35398 DPY19L1P2-201ENST00000426647 915 ntBASIC4.26□□□□□ -1.73
RORAP35398 RPS12P10-201ENST00000427031 377 ntBASIC4.26□□□□□ -1.73
RORAP35398 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RORAP35398 RPS29P17-201ENST00000430795 166 ntBASIC4.26□□□□□ -1.73
RORAP35398 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.26□□□□□ -1.73
RORAP35398 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.26□□□□□ -1.73
RORAP35398 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.26□□□□□ -1.73
RORAP35398 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.26□□□□□ -1.73
RORAP35398 AC239809.1-201ENST00000450470 217 ntBASIC4.26□□□□□ -1.73
RORAP35398 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.26□□□□□ -1.73
RORAP35398 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.26□□□□□ -1.73
RORAP35398 RN7SL98P-201ENST00000462271 300 ntBASIC4.26□□□□□ -1.73
RORAP35398 FTH1P2-201ENST00000466086 412 ntBASIC4.26□□□□□ -1.73
RORAP35398 AC053481.1-201ENST00000467217 306 ntBASIC4.26□□□□□ -1.73
RORAP35398 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
RORAP35398 RN7SL303P-201ENST00000469773 251 ntBASIC4.26□□□□□ -1.73
RORAP35398 AC010618.1-201ENST00000469924 477 ntBASIC4.26□□□□□ -1.73
RORAP35398 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.26□□□□□ -1.73
RORAP35398 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.26□□□□□ -1.73
RORAP35398 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.26□□□□□ -1.73
RORAP35398 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.26□□□□□ -1.73
RORAP35398 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.26□□□□□ -1.73
RORAP35398 DEFB109D-201ENST00000529497 240 ntBASIC4.26□□□□□ -1.73
RORAP35398 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.26□□□□□ -1.73
RORAP35398 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.26□□□□□ -1.73
RORAP35398 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RORAP35398 MIR4716-201ENST00000579628 84 ntBASIC4.26□□□□□ -1.73
RORAP35398 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.26□□□□□ -1.73
RORAP35398 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RORAP35398 BPIFA4P-203ENST00000603168 689 ntBASIC4.26□□□□□ -1.73
RORAP35398 AC020910.2-201ENST00000603635 610 ntBASIC4.26□□□□□ -1.73
RORAP35398 AC007423.1-201ENST00000605009 627 ntBASIC4.26□□□□□ -1.73
RORAP35398 AC008966.2-201ENST00000606157 453 ntBASIC4.26□□□□□ -1.73
RORAP35398 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RORAP35398 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.26□□□□□ -1.73
RORAP35398 AC009318.3-201ENST00000616916 503 ntBASIC4.26□□□□□ -1.73
RORAP35398 AC067852.7-201ENST00000623270 535 ntBASIC4.26□□□□□ -1.73
RORAP35398 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
RORAP35398 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
RORAP35398 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
RORAP35398 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.26□□□□□ -1.73
RORAP35398 AC009951.1-201ENST00000623674 2614 ntBASIC4.25□□□□□ -1.73
RORAP35398 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
RORAP35398 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
RORAP35398 AC018529.3-201ENST00000624212 2254 ntBASIC4.25□□□□□ -1.73
RORAP35398 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RORAP35398 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RORAP35398 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
RORAP35398 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
RORAP35398 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.25□□□□□ -1.73
RORAP35398 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RORAP35398 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RORAP35398 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RORAP35398 RNU6-891P-201ENST00000384280 111 ntBASIC4.25□□□□□ -1.73
RORAP35398 OR6C69P-201ENST00000394268 893 ntBASIC4.25□□□□□ -1.73
RORAP35398 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
RORAP35398 AL078604.1-201ENST00000404609 466 ntBASIC4.25□□□□□ -1.73
RORAP35398 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.25□□□□□ -1.73
RORAP35398 AL138785.1-201ENST00000425821 331 ntBASIC4.25□□□□□ -1.73
RORAP35398 MTCO3P21-201ENST00000430791 643 ntBASIC4.25□□□□□ -1.73
RORAP35398 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.25□□□□□ -1.73
RORAP35398 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.25□□□□□ -1.73
RORAP35398 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.25□□□□□ -1.73
RORAP35398 RN7SL817P-201ENST00000480777 288 ntBASIC4.25□□□□□ -1.73
RORAP35398 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RORAP35398 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.25□□□□□ -1.73
RORAP35398 RPS27AP16-201ENST00000492222 470 ntBASIC4.25□□□□□ -1.73
RORAP35398 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.25□□□□□ -1.73
RORAP35398 SEC11B-201ENST00000518383 499 ntBASIC4.25□□□□□ -1.73
RORAP35398 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RORAP35398 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.25□□□□□ -1.73
RORAP35398 AC138701.1-201ENST00000524329 714 ntBASIC4.25□□□□□ -1.73
RORAP35398 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.25□□□□□ -1.73
RORAP35398 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
RORAP35398 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.25□□□□□ -1.73
RORAP35398 EIF1AXP2-201ENST00000555940 413 ntBASIC4.25□□□□□ -1.73
RORAP35398 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.25□□□□□ -1.73
RORAP35398 AC091178.1-203ENST00000584586 279 ntBASIC4.25□□□□□ -1.73
RORAP35398 MIR3138-201ENST00000585238 82 ntBASIC4.25□□□□□ -1.73
RORAP35398 ADAD1P2-201ENST00000588476 646 ntBASIC4.25□□□□□ -1.73
RORAP35398 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.25□□□□□ -1.73
RORAP35398 AC020634.1-201ENST00000608701 549 ntBASIC4.25□□□□□ -1.73
RORAP35398 RMST_5.1-201ENST00000618704 126 ntBASIC4.25□□□□□ -1.73
RORAP35398 AL391597.1-201ENST00000618707 694 ntBASIC4.25□□□□□ -1.73
RORAP35398 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RORAP35398 AC006065.6-201ENST00000625201 545 ntBASIC4.25□□□□□ -1.73
RORAP35398 CFTRP2-201ENST00000634304 199 ntBASIC4.25□□□□□ -1.73
RORAP35398 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.25□□□□□ -1.73
RORAP35398 AL672167.1-205ENST00000641112 3080 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms