Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 MIR1269B-201ENST00000580405 75 ntBASIC2.97□□□□□ -1.93
CKS2P33552 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC2.97□□□□□ -1.93
CKS2P33552 AC069061.3-201ENST00000582254 823 ntBASIC2.97□□□□□ -1.93
CKS2P33552 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC2.97□□□□□ -1.93
CKS2P33552 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC2.97□□□□□ -1.93
CKS2P33552 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CKS2P33552 AC010680.3-201ENST00000604215 520 ntBASIC2.97□□□□□ -1.93
CKS2P33552 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC2.97□□□□□ -1.93
CKS2P33552 AC026124.2-201ENST00000621847 656 ntBASIC2.97□□□□□ -1.93
CKS2P33552 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC2.97□□□□□ -1.93
CKS2P33552 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
CKS2P33552 ERCC6-202ENST00000374127 1782 ntBASIC2.97□□□□□ -1.93
CKS2P33552 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CKS2P33552 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CKS2P33552 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
CKS2P33552 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
CKS2P33552 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
CKS2P33552 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC2.96□□□□□ -1.93
CKS2P33552 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
CKS2P33552 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
CKS2P33552 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC2.96□□□□□ -1.94
CKS2P33552 AC022893.2-201ENST00000564832 3296 ntBASIC2.96□□□□□ -1.94
CKS2P33552 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CKS2P33552 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CKS2P33552 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CKS2P33552 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC2.96□□□□□ -1.94
CKS2P33552 MIR331-201ENST00000362302 94 ntBASIC2.96□□□□□ -1.94
CKS2P33552 RN7SKP149-201ENST00000363008 344 ntBASIC2.96□□□□□ -1.94
CKS2P33552 MT-RNR1-201ENST00000389680 954 ntBASIC2.96□□□□□ -1.94
CKS2P33552 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC2.96□□□□□ -1.94
CKS2P33552 AC099535.1-201ENST00000408928 371 ntBASIC2.96□□□□□ -1.94
CKS2P33552 RPL6P29-201ENST00000414863 865 ntBASIC2.96□□□□□ -1.94
CKS2P33552 AL139095.3-201ENST00000419672 1203 ntBASIC2.96□□□□□ -1.94
CKS2P33552 AL138785.1-201ENST00000425821 331 ntBASIC2.96□□□□□ -1.94
CKS2P33552 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC2.96□□□□□ -1.94
CKS2P33552 NPM1P34-201ENST00000428821 893 ntBASIC2.96□□□□□ -1.94
CKS2P33552 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC2.96□□□□□ -1.94
CKS2P33552 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC2.96□□□□□ -1.94
CKS2P33552 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC2.96□□□□□ -1.94
CKS2P33552 CEACAMP7-201ENST00000444105 496 ntBASIC2.96□□□□□ -1.94
CKS2P33552 RPL7P31-201ENST00000450192 724 ntBASIC2.96□□□□□ -1.94
CKS2P33552 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC2.96□□□□□ -1.94
CKS2P33552 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC2.96□□□□□ -1.94
CKS2P33552 AC020593.1-201ENST00000507399 299 ntBASIC2.96□□□□□ -1.94
CKS2P33552 RNA5SP92-201ENST00000516437 110 ntBASIC2.96□□□□□ -1.94
CKS2P33552 RNU7-143P-201ENST00000516781 65 ntBASIC2.96□□□□□ -1.94
CKS2P33552 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC2.96□□□□□ -1.94
CKS2P33552 OR5M2P-201ENST00000529003 936 ntBASIC2.96□□□□□ -1.94
CKS2P33552 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC2.96□□□□□ -1.94
CKS2P33552 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC2.96□□□□□ -1.94
CKS2P33552 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC2.96□□□□□ -1.94
CKS2P33552 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC2.96□□□□□ -1.94
CKS2P33552 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC2.96□□□□□ -1.94
CKS2P33552 AL133457.1-201ENST00000564251 987 ntBASIC2.96□□□□□ -1.94
CKS2P33552 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CKS2P33552 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CKS2P33552 MIR4644-201ENST00000579929 84 ntBASIC2.96□□□□□ -1.94
CKS2P33552 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC2.96□□□□□ -1.94
CKS2P33552 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC2.96□□□□□ -1.94
CKS2P33552 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC2.96□□□□□ -1.94
CKS2P33552 AL031320.1-201ENST00000604177 357 ntBASIC2.96□□□□□ -1.94
CKS2P33552 AC090953.1-201ENST00000604305 1092 ntBASIC2.96□□□□□ -1.94
CKS2P33552 AL034351.1-201ENST00000605288 668 ntBASIC2.96□□□□□ -1.94
CKS2P33552 AC015982.1-201ENST00000608113 465 ntBASIC2.96□□□□□ -1.94
CKS2P33552 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC2.96□□□□□ -1.94
CKS2P33552 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC2.96□□□□□ -1.94
CKS2P33552 AL049536.1-201ENST00000625043 744 ntBASIC2.96□□□□□ -1.94
CKS2P33552 AL353746.1-201ENST00000566293 6881 ntBASIC2.96□□□□□ -1.94
CKS2P33552 CEP170P1-201ENST00000502249 4587 ntBASIC2.96□□□□□ -1.94
CKS2P33552 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CKS2P33552 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CKS2P33552 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CKS2P33552 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CKS2P33552 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC2.96□□□□□ -1.94
CKS2P33552 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC2.96□□□□□ -1.94
CKS2P33552 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CKS2P33552 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC2.95□□□□□ -1.94
CKS2P33552 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CKS2P33552 AC025031.4-201ENST00000621248 3271 ntBASIC2.95□□□□□ -1.94
CKS2P33552 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC2.95□□□□□ -1.94
CKS2P33552 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CKS2P33552 OR5P1P-201ENST00000299512 925 ntBASIC2.95□□□□□ -1.94
CKS2P33552 AC107977.1-201ENST00000355745 939 ntBASIC2.95□□□□□ -1.94
CKS2P33552 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CKS2P33552 RN7SKP213-201ENST00000410746 298 ntBASIC2.95□□□□□ -1.94
CKS2P33552 RN7SKP106-201ENST00000410832 272 ntBASIC2.95□□□□□ -1.94
CKS2P33552 NAP1L1P2-201ENST00000414182 1089 ntBASIC2.95□□□□□ -1.94
CKS2P33552 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CKS2P33552 VN1R31P-201ENST00000417498 730 ntBASIC2.95□□□□□ -1.94
CKS2P33552 RPL24P2-201ENST00000421023 475 ntBASIC2.95□□□□□ -1.94
CKS2P33552 RPL7AP25-201ENST00000423357 805 ntBASIC2.95□□□□□ -1.94
CKS2P33552 AC011998.1-201ENST00000433403 117 ntBASIC2.95□□□□□ -1.94
CKS2P33552 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC2.95□□□□□ -1.94
CKS2P33552 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC2.95□□□□□ -1.94
CKS2P33552 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC2.95□□□□□ -1.94
CKS2P33552 AC091685.2-201ENST00000454924 864 ntBASIC2.95□□□□□ -1.94
CKS2P33552 SETP20-201ENST00000457046 852 ntBASIC2.95□□□□□ -1.94
CKS2P33552 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC2.95□□□□□ -1.94
CKS2P33552 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC2.95□□□□□ -1.94
CKS2P33552 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms