Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 CCT7-217ENST00000626868 249 ntTSL 5 BASIC6.37□□□□□ -1.39
CLIP1P30622 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC6.37□□□□□ -1.39
CLIP1P30622 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC6.37□□□□□ -1.39
CLIP1P30622 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
CLIP1P30622 Z82217.1-201ENST00000625157 8149 ntBASIC6.37□□□□□ -1.39
CLIP1P30622 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
CLIP1P30622 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CLIP1P30622 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CLIP1P30622 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CLIP1P30622 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CLIP1P30622 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CLIP1P30622 RN7SKP199-201ENST00000410325 305 ntBASIC6.36□□□□□ -1.39
CLIP1P30622 GSTM3P2-201ENST00000412746 530 ntBASIC6.36□□□□□ -1.39
CLIP1P30622 ARL4AP4-201ENST00000434170 518 ntBASIC6.36□□□□□ -1.39
CLIP1P30622 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC6.36□□□□□ -1.39
CLIP1P30622 AC005255.1-201ENST00000593748 216 ntBASIC6.36□□□□□ -1.39
CLIP1P30622 AC024220.1-201ENST00000603675 484 ntBASIC6.36□□□□□ -1.39
CLIP1P30622 AC095038.2-201ENST00000621464 1070 ntBASIC6.36□□□□□ -1.39
CLIP1P30622 AL356121.2-201ENST00000624715 780 ntBASIC6.36□□□□□ -1.39
CLIP1P30622 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
CLIP1P30622 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CLIP1P30622 SNORA63.1-201ENST00000362493 131 ntBASIC6.35□□□□□ -1.39
CLIP1P30622 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC6.35□□□□□ -1.39
CLIP1P30622 AL050321.1-201ENST00000432363 400 ntBASIC6.35□□□□□ -1.39
CLIP1P30622 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.35□□□□□ -1.39
CLIP1P30622 RNA5SP179-201ENST00000517284 121 ntBASIC6.35□□□□□ -1.39
CLIP1P30622 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC6.35□□□□□ -1.39
CLIP1P30622 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CLIP1P30622 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC6.35□□□□□ -1.39
CLIP1P30622 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC6.35□□□□□ -1.39
CLIP1P30622 SNX6P1-201ENST00000601728 1224 ntBASIC6.35□□□□□ -1.39
CLIP1P30622 AL121772.2-201ENST00000614331 297 ntBASIC6.35□□□□□ -1.39
CLIP1P30622 FP236240.3-201ENST00000623061 327 ntBASIC6.35□□□□□ -1.39
CLIP1P30622 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC6.35□□□□□ -1.39
CLIP1P30622 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
CLIP1P30622 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
CLIP1P30622 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CLIP1P30622 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC6.35□□□□□ -1.39
CLIP1P30622 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
CLIP1P30622 PTMAP3-201ENST00000447474 330 ntBASIC6.34□□□□□ -1.39
CLIP1P30622 GAPDHP36-201ENST00000480688 918 ntBASIC6.34□□□□□ -1.39
CLIP1P30622 AC007991.1-201ENST00000522680 631 ntBASIC6.34□□□□□ -1.39
CLIP1P30622 OR5M7P-201ENST00000526140 972 ntBASIC6.34□□□□□ -1.39
CLIP1P30622 AL121834.1-201ENST00000572284 509 ntBASIC6.34□□□□□ -1.39
CLIP1P30622 MIR3944-201ENST00000581277 108 ntBASIC6.34□□□□□ -1.39
CLIP1P30622 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC6.34□□□□□ -1.39
CLIP1P30622 AC091167.4-201ENST00000605079 184 ntBASIC6.34□□□□□ -1.39
CLIP1P30622 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CLIP1P30622 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CLIP1P30622 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CLIP1P30622 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CLIP1P30622 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
CLIP1P30622 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.4
CLIP1P30622 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
CLIP1P30622 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
CLIP1P30622 OR4A15-201ENST00000314706 1035 ntBASIC6.33□□□□□ -1.4
CLIP1P30622 RPS3AP25-201ENST00000411660 793 ntBASIC6.33□□□□□ -1.4
CLIP1P30622 ARL6IP1P2-201ENST00000431356 563 ntBASIC6.33□□□□□ -1.4
CLIP1P30622 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CLIP1P30622 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC6.33□□□□□ -1.4
CLIP1P30622 RN7SL585P-201ENST00000470538 280 ntBASIC6.33□□□□□ -1.4
CLIP1P30622 AC006499.6-201ENST00000511169 607 ntBASIC6.33□□□□□ -1.4
CLIP1P30622 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC6.33□□□□□ -1.4
CLIP1P30622 SCARNA14-201ENST00000516903 136 ntBASIC6.33□□□□□ -1.4
CLIP1P30622 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC6.33□□□□□ -1.4
CLIP1P30622 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC6.33□□□□□ -1.4
CLIP1P30622 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC6.33□□□□□ -1.4
CLIP1P30622 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC6.33□□□□□ -1.4
CLIP1P30622 SNORA51-201ENST00000606420 132 ntBASIC6.33□□□□□ -1.4
CLIP1P30622 OR7M1P-201ENST00000608946 533 ntBASIC6.33□□□□□ -1.4
CLIP1P30622 PACRG-211ENST00000621363 360 ntTSL 5 BASIC6.33□□□□□ -1.4
CLIP1P30622 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CLIP1P30622 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CLIP1P30622 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
CLIP1P30622 OFD1P5Y-201ENST00000447585 2590 ntBASIC6.33□□□□□ -1.4
CLIP1P30622 GOT2P5-201ENST00000433995 546 ntBASIC6.33□□□□□ -1.4
CLIP1P30622 OR9M1P-201ENST00000459641 921 ntBASIC6.33□□□□□ -1.4
CLIP1P30622 AL139099.1-201ENST00000497398 403 ntBASIC6.33□□□□□ -1.4
CLIP1P30622 TCP11X3P-202ENST00000514289 1254 ntBASIC6.33□□□□□ -1.4
CLIP1P30622 AC026403.1-201ENST00000518938 295 ntBASIC6.33□□□□□ -1.4
CLIP1P30622 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC6.33□□□□□ -1.4
CLIP1P30622 AC103968.1-201ENST00000557841 573 ntBASIC6.33□□□□□ -1.4
CLIP1P30622 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC6.33□□□□□ -1.4
CLIP1P30622 AC068020.1-201ENST00000594215 661 ntBASIC6.33□□□□□ -1.4
CLIP1P30622 AC023632.6-201ENST00000624338 2177 ntBASIC6.33□□□□□ -1.4
CLIP1P30622 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6.32□□□□□ -1.4
CLIP1P30622 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CLIP1P30622 AC021242.1-201ENST00000507315 2035 ntBASIC6.32□□□□□ -1.4
CLIP1P30622 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CLIP1P30622 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
CLIP1P30622 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC6.32□□□□□ -1.4
CLIP1P30622 AL157884.3-201ENST00000448273 1184 ntBASIC6.32□□□□□ -1.4
CLIP1P30622 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC6.32□□□□□ -1.4
CLIP1P30622 RN7SKP157-201ENST00000516174 282 ntBASIC6.32□□□□□ -1.4
CLIP1P30622 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC6.32□□□□□ -1.4
CLIP1P30622 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC6.32□□□□□ -1.4
CLIP1P30622 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC6.32□□□□□ -1.4
CLIP1P30622 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC6.32□□□□□ -1.4
CLIP1P30622 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC6.32□□□□□ -1.4
CLIP1P30622 CCNG2P1-201ENST00000549521 1000 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms