Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC008638.1-201ENST00000506035 866 ntBASIC4.75□□□□□ -1.65
ABCD3P28288 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.75□□□□□ -1.65
ABCD3P28288 AC016559.2-201ENST00000510759 359 ntBASIC4.75□□□□□ -1.65
ABCD3P28288 AC034205.1-201ENST00000520621 638 ntBASIC4.75□□□□□ -1.65
ABCD3P28288 OR8G5-201ENST00000524943 1041 ntBASIC4.75□□□□□ -1.65
ABCD3P28288 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.75□□□□□ -1.65
ABCD3P28288 AP001317.1-201ENST00000531194 960 ntBASIC4.75□□□□□ -1.65
ABCD3P28288 AC027369.5-201ENST00000533838 755 ntBASIC4.75□□□□□ -1.65
ABCD3P28288 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
ABCD3P28288 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
ABCD3P28288 AC092747.2-201ENST00000545069 983 ntBASIC4.75□□□□□ -1.65
ABCD3P28288 SETP1-201ENST00000556014 845 ntBASIC4.75□□□□□ -1.65
ABCD3P28288 AC116553.2-201ENST00000564203 463 ntBASIC4.75□□□□□ -1.65
ABCD3P28288 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.75□□□□□ -1.65
ABCD3P28288 MIR3691-201ENST00000578066 90 ntBASIC4.75□□□□□ -1.65
ABCD3P28288 AC090312.1-201ENST00000580637 348 ntBASIC4.75□□□□□ -1.65
ABCD3P28288 AC011447.4-201ENST00000587562 111 ntBASIC4.75□□□□□ -1.65
ABCD3P28288 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.75□□□□□ -1.65
ABCD3P28288 AP001160.4-201ENST00000596971 382 ntBASIC4.75□□□□□ -1.65
ABCD3P28288 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.75□□□□□ -1.65
ABCD3P28288 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.75□□□□□ -1.65
ABCD3P28288 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.75□□□□□ -1.65
ABCD3P28288 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.75□□□□□ -1.65
ABCD3P28288 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.75□□□□□ -1.65
ABCD3P28288 AC120338.1-201ENST00000625074 1541 ntBASIC4.75□□□□□ -1.65
ABCD3P28288 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ABCD3P28288 AL450345.1-202ENST00000605741 3881 ntBASIC4.75□□□□□ -1.65
ABCD3P28288 MTND4P8-201ENST00000514997 1362 ntBASIC4.75□□□□□ -1.65
ABCD3P28288 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.75□□□□□ -1.65
ABCD3P28288 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ABCD3P28288 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.75□□□□□ -1.65
ABCD3P28288 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.74□□□□□ -1.65
ABCD3P28288 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
ABCD3P28288 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ABCD3P28288 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
ABCD3P28288 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ABCD3P28288 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ABCD3P28288 AC099786.3-201ENST00000565735 1410 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
ABCD3P28288 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
ABCD3P28288 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.74□□□□□ -1.65
ABCD3P28288 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.74□□□□□ -1.65
ABCD3P28288 RNU4-44P-201ENST00000363050 141 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 RNU6-839P-201ENST00000363347 108 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ABCD3P28288 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.74□□□□□ -1.65
ABCD3P28288 AL136310.1-201ENST00000404926 654 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.74□□□□□ -1.65
ABCD3P28288 AL450992.3-201ENST00000413192 568 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 PCNPP4-201ENST00000414817 517 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 RPS3AP37-201ENST00000419176 745 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 AC233981.1-201ENST00000423224 461 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.74□□□□□ -1.65
ABCD3P28288 USP12PY-201ENST00000427677 1064 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 AC009238.2-201ENST00000431026 355 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.74□□□□□ -1.65
ABCD3P28288 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.74□□□□□ -1.65
ABCD3P28288 RAB11AP1-201ENST00000442978 646 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 RPL7P59-201ENST00000447700 943 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 AL589880.1-201ENST00000448271 287 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 AC104306.1-201ENST00000449702 371 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 OR52E3P-201ENST00000452083 936 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 HMGN3P1-201ENST00000453847 193 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ABCD3P28288 RPS15AP1-201ENST00000457423 391 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.74□□□□□ -1.65
ABCD3P28288 AC097484.1-201ENST00000471148 389 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.74□□□□□ -1.65
ABCD3P28288 BX284632.1-201ENST00000478218 541 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 AC011037.1-201ENST00000483964 558 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 AC004815.1-201ENST00000484185 331 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 AC134050.1-201ENST00000495088 933 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.74□□□□□ -1.65
ABCD3P28288 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.74□□□□□ -1.65
ABCD3P28288 AC113347.3-201ENST00000509113 148 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.74□□□□□ -1.65
ABCD3P28288 KRT19P6-201ENST00000510983 209 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.74□□□□□ -1.65
ABCD3P28288 RNU6-202P-201ENST00000515998 96 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.74□□□□□ -1.65
ABCD3P28288 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.74□□□□□ -1.65
ABCD3P28288 AC092490.3-201ENST00000545370 572 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.74□□□□□ -1.65
ABCD3P28288 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.74□□□□□ -1.65
ABCD3P28288 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.74□□□□□ -1.65
ABCD3P28288 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.74□□□□□ -1.65
ABCD3P28288 AGGF1P6-201ENST00000569213 976 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 AC022884.2-201ENST00000578535 580 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.74□□□□□ -1.65
ABCD3P28288 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.74□□□□□ -1.65
ABCD3P28288 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.74□□□□□ -1.65
ABCD3P28288 AL035411.2-201ENST00000604022 421 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 AC021749.1-201ENST00000604322 607 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 AP003973.1-201ENST00000604639 691 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.74□□□□□ -1.65
ABCD3P28288 AL359535.1-201ENST00000612100 1087 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 RPSAP73-201ENST00000614820 330 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 AC016769.4-201ENST00000616893 535 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 AC091932.2-201ENST00000623014 291 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms