Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.2□□□□□ -1.58
CD40P25942 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CD40P25942 AC079922.1-201ENST00000443291 359 ntBASIC5.2□□□□□ -1.58
CD40P25942 AC244505.5-201ENST00000443639 207 ntBASIC5.2□□□□□ -1.58
CD40P25942 USP9YP12-201ENST00000450481 570 ntBASIC5.2□□□□□ -1.58
CD40P25942 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.2□□□□□ -1.58
CD40P25942 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC5.2□□□□□ -1.58
CD40P25942 AC026410.2-201ENST00000460281 156 ntBASIC5.2□□□□□ -1.58
CD40P25942 AL122020.1-201ENST00000472287 459 ntBASIC5.2□□□□□ -1.58
CD40P25942 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC5.2□□□□□ -1.58
CD40P25942 AC012123.2-201ENST00000485809 248 ntBASIC5.2□□□□□ -1.58
CD40P25942 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.2□□□□□ -1.58
CD40P25942 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.2□□□□□ -1.58
CD40P25942 AC106872.3-201ENST00000495104 446 ntBASIC5.2□□□□□ -1.58
CD40P25942 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.2□□□□□ -1.58
CD40P25942 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.2□□□□□ -1.58
CD40P25942 AC011411.1-201ENST00000509592 876 ntBASIC5.2□□□□□ -1.58
CD40P25942 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.2□□□□□ -1.58
CD40P25942 AC104986.1-201ENST00000517978 436 ntBASIC5.2□□□□□ -1.58
CD40P25942 TPM3P3-201ENST00000521343 354 ntBASIC5.2□□□□□ -1.58
CD40P25942 OR5M7P-201ENST00000526140 972 ntBASIC5.2□□□□□ -1.58
CD40P25942 MTND4LP18-201ENST00000526864 291 ntBASIC5.2□□□□□ -1.58
CD40P25942 ZNF705CP-201ENST00000530515 889 ntBASIC5.2□□□□□ -1.58
CD40P25942 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC5.2□□□□□ -1.58
CD40P25942 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.2□□□□□ -1.58
CD40P25942 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.2□□□□□ -1.58
CD40P25942 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.2□□□□□ -1.58
CD40P25942 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.2□□□□□ -1.58
CD40P25942 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.2□□□□□ -1.58
CD40P25942 AC008521.2-201ENST00000591021 259 ntBASIC5.2□□□□□ -1.58
CD40P25942 BNIP3P8-201ENST00000597863 560 ntBASIC5.2□□□□□ -1.58
CD40P25942 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC5.2□□□□□ -1.58
CD40P25942 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC5.2□□□□□ -1.58
CD40P25942 RDM1-219ENST00000615378 542 ntTSL 3 BASIC5.2□□□□□ -1.58
CD40P25942 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC5.2□□□□□ -1.58
CD40P25942 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.2□□□□□ -1.58
CD40P25942 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC5.2□□□□□ -1.58
CD40P25942 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.2□□□□□ -1.58
CD40P25942 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CD40P25942 AC027088.4-201ENST00000611559 1947 ntBASIC5.2□□□□□ -1.58
CD40P25942 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CD40P25942 AC091305.2-201ENST00000624049 1576 ntBASIC5.2□□□□□ -1.58
CD40P25942 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.2□□□□□ -1.58
CD40P25942 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CD40P25942 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.19□□□□□ -1.58
CD40P25942 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CD40P25942 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.19□□□□□ -1.58
CD40P25942 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.19□□□□□ -1.58
CD40P25942 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CD40P25942 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.19□□□□□ -1.58
CD40P25942 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.19□□□□□ -1.58
CD40P25942 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CD40P25942 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CD40P25942 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CD40P25942 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CD40P25942 RNU6-809P-201ENST00000384461 107 ntBASIC5.19□□□□□ -1.58
CD40P25942 ZNF603P-201ENST00000405613 487 ntBASIC5.19□□□□□ -1.58
CD40P25942 MIR1203-201ENST00000408812 85 ntBASIC5.19□□□□□ -1.58
CD40P25942 Y_RNA.598-201ENST00000410480 95 ntBASIC5.19□□□□□ -1.58
CD40P25942 RNU6-603P-201ENST00000411403 107 ntBASIC5.19□□□□□ -1.58
CD40P25942 AL354890.1-201ENST00000413730 346 ntBASIC5.19□□□□□ -1.58
CD40P25942 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.19□□□□□ -1.58
CD40P25942 HMGB3P23-201ENST00000414981 585 ntBASIC5.19□□□□□ -1.58
CD40P25942 AC007562.1-201ENST00000421819 517 ntBASIC5.19□□□□□ -1.58
CD40P25942 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CD40P25942 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CD40P25942 NPM1P34-201ENST00000428821 893 ntBASIC5.19□□□□□ -1.58
CD40P25942 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.19□□□□□ -1.58
CD40P25942 CYCSP12-201ENST00000437729 300 ntBASIC5.19□□□□□ -1.58
CD40P25942 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.19□□□□□ -1.58
CD40P25942 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.19□□□□□ -1.58
CD40P25942 CEACAMP9-201ENST00000442990 513 ntBASIC5.19□□□□□ -1.58
CD40P25942 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.19□□□□□ -1.58
CD40P25942 AC073109.1-201ENST00000445066 978 ntBASIC5.19□□□□□ -1.58
CD40P25942 AC023274.2-201ENST00000445264 521 ntBASIC5.19□□□□□ -1.58
CD40P25942 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CD40P25942 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC5.19□□□□□ -1.58
CD40P25942 EEF1A1P1-201ENST00000447052 739 ntBASIC5.19□□□□□ -1.58
CD40P25942 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC5.19□□□□□ -1.58
CD40P25942 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.19□□□□□ -1.58
CD40P25942 PAXBP1P1-201ENST00000449315 447 ntBASIC5.19□□□□□ -1.58
CD40P25942 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.19□□□□□ -1.58
CD40P25942 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.19□□□□□ -1.58
CD40P25942 AL033528.1-201ENST00000453780 140 ntBASIC5.19□□□□□ -1.58
CD40P25942 AC090142.1-201ENST00000465776 462 ntBASIC5.19□□□□□ -1.58
CD40P25942 RPL7P22-201ENST00000466005 733 ntBASIC5.19□□□□□ -1.58
CD40P25942 AC011476.1-201ENST00000466725 307 ntBASIC5.19□□□□□ -1.58
CD40P25942 AC126182.1-201ENST00000478134 357 ntBASIC5.19□□□□□ -1.58
CD40P25942 AL358832.1-201ENST00000497800 389 ntBASIC5.19□□□□□ -1.58
CD40P25942 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CD40P25942 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.19□□□□□ -1.58
CD40P25942 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC5.19□□□□□ -1.58
CD40P25942 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.19□□□□□ -1.58
CD40P25942 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.19□□□□□ -1.58
CD40P25942 AC110775.1-201ENST00000513721 462 ntBASIC5.19□□□□□ -1.58
CD40P25942 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.19□□□□□ -1.58
CD40P25942 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.19□□□□□ -1.58
CD40P25942 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.19□□□□□ -1.58
CD40P25942 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.19□□□□□ -1.58
CD40P25942 PCNAP4-201ENST00000532690 730 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms