Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.04□□□□□ -1.28
RFX1P22670 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RFX1P22670 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC7.04□□□□□ -1.28
RFX1P22670 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
RFX1P22670 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
RFX1P22670 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
RFX1P22670 Y_RNA.1-201ENST00000352915 104 ntBASIC7.04□□□□□ -1.28
RFX1P22670 RN7SKP78-201ENST00000364711 318 ntBASIC7.04□□□□□ -1.28
RFX1P22670 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.04□□□□□ -1.28
RFX1P22670 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
RFX1P22670 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
RFX1P22670 RPL5P20-201ENST00000403848 896 ntBASIC7.04□□□□□ -1.28
RFX1P22670 HSD17B7P1-201ENST00000412419 1017 ntBASIC7.04□□□□□ -1.28
RFX1P22670 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC7.04□□□□□ -1.28
RFX1P22670 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC7.04□□□□□ -1.28
RFX1P22670 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC7.04□□□□□ -1.28
RFX1P22670 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC7.04□□□□□ -1.28
RFX1P22670 NPM1P24-201ENST00000428039 894 ntBASIC7.04□□□□□ -1.28
RFX1P22670 RPL22P17-201ENST00000438729 315 ntBASIC7.04□□□□□ -1.28
RFX1P22670 FHP1-201ENST00000442741 703 ntBASIC7.04□□□□□ -1.28
RFX1P22670 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC7.04□□□□□ -1.28
RFX1P22670 FABP3P2-201ENST00000453169 399 ntBASIC7.04□□□□□ -1.28
RFX1P22670 SNX18P26-201ENST00000458433 740 ntBASIC7.04□□□□□ -1.28
RFX1P22670 AC104563.1-201ENST00000476147 376 ntBASIC7.04□□□□□ -1.28
RFX1P22670 RBM43P1-201ENST00000476891 1081 ntBASIC7.04□□□□□ -1.28
RFX1P22670 RN7SL214P-201ENST00000487317 265 ntBASIC7.04□□□□□ -1.28
RFX1P22670 RPL17P2-201ENST00000491913 451 ntBASIC7.04□□□□□ -1.28
RFX1P22670 THAP6-203ENST00000502620 582 ntTSL 3 BASIC7.04□□□□□ -1.28
RFX1P22670 AC114967.1-201ENST00000504890 259 ntBASIC7.04□□□□□ -1.28
RFX1P22670 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC7.04□□□□□ -1.28
RFX1P22670 RNU6-201P-201ENST00000517100 61 ntBASIC7.04□□□□□ -1.28
RFX1P22670 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC7.04□□□□□ -1.28
RFX1P22670 TBCA-209ENST00000522370 435 ntTSL 3 BASIC7.04□□□□□ -1.28
RFX1P22670 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC7.04□□□□□ -1.28
RFX1P22670 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.04□□□□□ -1.28
RFX1P22670 AP005639.1-201ENST00000526939 192 ntBASIC7.04□□□□□ -1.28
RFX1P22670 RAB11AP2-201ENST00000545905 639 ntBASIC7.04□□□□□ -1.28
RFX1P22670 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC7.04□□□□□ -1.28
RFX1P22670 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC7.04□□□□□ -1.28
RFX1P22670 SULT1C2P2-201ENST00000562517 294 ntBASIC7.04□□□□□ -1.28
RFX1P22670 AL133457.1-201ENST00000564251 987 ntBASIC7.04□□□□□ -1.28
RFX1P22670 AC090312.1-201ENST00000580637 348 ntBASIC7.04□□□□□ -1.28
RFX1P22670 MAGOH2P-202ENST00000584384 429 ntBASIC7.04□□□□□ -1.28
RFX1P22670 RPL29P33-201ENST00000587474 316 ntBASIC7.04□□□□□ -1.28
RFX1P22670 APOC2-205ENST00000592257 444 ntTSL 3 BASIC7.04□□□□□ -1.28
RFX1P22670 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.04□□□□□ -1.28
RFX1P22670 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC7.04□□□□□ -1.28
RFX1P22670 AL138895.2-201ENST00000603019 178 ntBASIC7.04□□□□□ -1.28
RFX1P22670 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RFX1P22670 RNU4-89P-201ENST00000607443 133 ntBASIC7.04□□□□□ -1.28
RFX1P22670 AC092681.3-201ENST00000609463 678 ntBASIC7.04□□□□□ -1.28
RFX1P22670 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RFX1P22670 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC7.04□□□□□ -1.28
RFX1P22670 AC005899.7-201ENST00000618199 588 ntBASIC7.04□□□□□ -1.28
RFX1P22670 AL122023.1-201ENST00000622847 530 ntBASIC7.04□□□□□ -1.28
RFX1P22670 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC7.04□□□□□ -1.28
RFX1P22670 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC7.04□□□□□ -1.28
RFX1P22670 AL132640.3-201ENST00000630473 177 ntBASIC7.04□□□□□ -1.28
RFX1P22670 CCT4P2-201ENST00000233836 1548 ntBASIC7.04□□□□□ -1.28
RFX1P22670 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RFX1P22670 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC7.04□□□□□ -1.28
RFX1P22670 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
RFX1P22670 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RFX1P22670 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7.04□□□□□ -1.28
RFX1P22670 AL591848.4-201ENST00000567832 3472 ntBASIC7.04□□□□□ -1.28
RFX1P22670 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RFX1P22670 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
RFX1P22670 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RFX1P22670 AC022034.1-201ENST00000512867 2156 ntBASIC7.03□□□□□ -1.28
RFX1P22670 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RFX1P22670 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.03□□□□□ -1.28
RFX1P22670 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
RFX1P22670 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.03□□□□□ -1.28
RFX1P22670 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RFX1P22670 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
RFX1P22670 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
RFX1P22670 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
RFX1P22670 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
RFX1P22670 GNG5P1-201ENST00000255500 204 ntBASIC7.03□□□□□ -1.28
RFX1P22670 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
RFX1P22670 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
RFX1P22670 SNORA51.6-201ENST00000384151 125 ntBASIC7.03□□□□□ -1.28
RFX1P22670 AP003170.5-201ENST00000397185 335 ntBASIC7.03□□□□□ -1.28
RFX1P22670 DSTNP4-201ENST00000399472 474 ntBASIC7.03□□□□□ -1.28
RFX1P22670 DHFRP6-201ENST00000401776 268 ntBASIC7.03□□□□□ -1.28
RFX1P22670 RNU2-8P-201ENST00000410727 190 ntBASIC7.03□□□□□ -1.28
RFX1P22670 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC7.03□□□□□ -1.28
RFX1P22670 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC7.03□□□□□ -1.28
RFX1P22670 USP9YP27-201ENST00000418455 438 ntBASIC7.03□□□□□ -1.28
RFX1P22670 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC7.03□□□□□ -1.28
RFX1P22670 ISCA1P6-201ENST00000427740 390 ntBASIC7.03□□□□□ -1.28
RFX1P22670 RPS27AP6-201ENST00000427962 448 ntBASIC7.03□□□□□ -1.28
RFX1P22670 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC7.03□□□□□ -1.28
RFX1P22670 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.03□□□□□ -1.28
RFX1P22670 FCF1P1-201ENST00000432690 571 ntBASIC7.03□□□□□ -1.28
RFX1P22670 RPS3AP38-201ENST00000435889 763 ntBASIC7.03□□□□□ -1.28
RFX1P22670 POU5F1P5-201ENST00000445059 658 ntBASIC7.03□□□□□ -1.28
RFX1P22670 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC7.03□□□□□ -1.28
RFX1P22670 C1DP4-201ENST00000455429 424 ntBASIC7.03□□□□□ -1.28
RFX1P22670 AC104109.1-201ENST00000498563 436 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms