Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.8□□□□□ -1.64
PDGFRAP16234 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFRAP16234 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.8□□□□□ -1.64
PDGFRAP16234 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.8□□□□□ -1.64
PDGFRAP16234 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.8□□□□□ -1.64
PDGFRAP16234 RNU6-467P-201ENST00000517027 110 ntBASIC4.8□□□□□ -1.64
PDGFRAP16234 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.8□□□□□ -1.64
PDGFRAP16234 VTA1P2-201ENST00000520205 911 ntBASIC4.8□□□□□ -1.64
PDGFRAP16234 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.8□□□□□ -1.64
PDGFRAP16234 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.8□□□□□ -1.64
PDGFRAP16234 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.8□□□□□ -1.64
PDGFRAP16234 AC079148.1-201ENST00000565944 819 ntBASIC4.8□□□□□ -1.64
PDGFRAP16234 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.8□□□□□ -1.64
PDGFRAP16234 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.8□□□□□ -1.64
PDGFRAP16234 AF230666.2-201ENST00000602328 725 ntBASIC4.8□□□□□ -1.64
PDGFRAP16234 AL133338.2-201ENST00000604292 736 ntBASIC4.8□□□□□ -1.64
PDGFRAP16234 AC079610.2-201ENST00000604818 690 ntBASIC4.8□□□□□ -1.64
PDGFRAP16234 AC008966.2-201ENST00000606157 453 ntBASIC4.8□□□□□ -1.64
PDGFRAP16234 AC017076.1-201ENST00000607613 578 ntBASIC4.8□□□□□ -1.64
PDGFRAP16234 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.8□□□□□ -1.64
PDGFRAP16234 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
PDGFRAP16234 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFRAP16234 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFRAP16234 MAPK10-286ENST00000641208 8747 ntBASIC4.8□□□□□ -1.64
PDGFRAP16234 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.8□□□□□ -1.64
PDGFRAP16234 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PDGFRAP16234 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFRAP16234 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.8□□□□□ -1.64
PDGFRAP16234 Z98755.1-201ENST00000407015 1384 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 HSPD1P14-201ENST00000432666 1618 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
PDGFRAP16234 MTND5P11-201ENST00000511037 1812 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 SCN1A-220ENST00000641603 12506 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
PDGFRAP16234 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDGFRAP16234 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.79□□□□□ -1.64
PDGFRAP16234 AC021146.4-201ENST00000309229 279 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 IGKV7-3-201ENST00000357453 298 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 RNU6-984P-201ENST00000363236 109 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 RNU6-792P-201ENST00000363490 107 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 MIR92A2-201ENST00000385299 75 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 SNORD96B-201ENST00000386148 79 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 HSPD1P16-201ENST00000402302 394 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.79□□□□□ -1.64
PDGFRAP16234 AL358176.3-201ENST00000420757 454 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PDGFRAP16234 RPL12P34-201ENST00000424532 479 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 AC012519.1-201ENST00000424588 610 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.79□□□□□ -1.64
PDGFRAP16234 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PDGFRAP16234 RPL12P28-201ENST00000430852 489 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.79□□□□□ -1.64
PDGFRAP16234 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.79□□□□□ -1.64
PDGFRAP16234 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.79□□□□□ -1.64
PDGFRAP16234 MED6P1-201ENST00000439659 713 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 AC069540.1-201ENST00000446320 988 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PDGFRAP16234 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.79□□□□□ -1.64
PDGFRAP16234 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.79□□□□□ -1.64
PDGFRAP16234 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.79□□□□□ -1.64
PDGFRAP16234 AC111000.3-201ENST00000508057 576 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.79□□□□□ -1.64
PDGFRAP16234 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.79□□□□□ -1.64
PDGFRAP16234 HMGB1P19-201ENST00000517578 577 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 AP002812.4-201ENST00000532139 286 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 OSBPL9P3-201ENST00000534523 595 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.79□□□□□ -1.64
PDGFRAP16234 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.79□□□□□ -1.64
PDGFRAP16234 AL136520.1-202ENST00000555494 763 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 HNRNPCP4-201ENST00000571636 900 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 AC091178.1-203ENST00000584586 279 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 ADAD1P2-201ENST00000588476 646 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 HMGB2P1-201ENST00000591146 634 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 ZNF92P3-201ENST00000596594 954 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 AC005034.4-201ENST00000603612 899 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 AC008745.1-201ENST00000604064 271 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 AC018618.2-201ENST00000604770 446 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 RPL21P136-201ENST00000605378 396 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 AC006213.5-201ENST00000619673 288 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 AC097460.3-201ENST00000623099 442 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.79□□□□□ -1.64
PDGFRAP16234 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.79□□□□□ -1.64
PDGFRAP16234 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.79□□□□□ -1.64
PDGFRAP16234 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.79□□□□□ -1.64
PDGFRAP16234 AL049555.1-201ENST00000562834 1933 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 CYP1D1P-201ENST00000416662 1433 ntBASIC4.79□□□□□ -1.64
PDGFRAP16234 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDGFRAP16234 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
PDGFRAP16234 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
PDGFRAP16234 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PDGFRAP16234 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.78□□□□□ -1.64
PDGFRAP16234 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.78□□□□□ -1.64
PDGFRAP16234 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PDGFRAP16234 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PDGFRAP16234 METTL21EP-201ENST00000298105 713 ntBASIC4.78□□□□□ -1.64
PDGFRAP16234 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PDGFRAP16234 RNU6-317P-201ENST00000384031 107 ntBASIC4.78□□□□□ -1.64
PDGFRAP16234 SNORA70F-201ENST00000384142 135 ntBASIC4.78□□□□□ -1.64
PDGFRAP16234 MIR142-201ENST00000384835 87 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms