Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.69□□□□□ -1.5
COL6A2P12110 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.69□□□□□ -1.5
COL6A2P12110 AC144833.1-201ENST00000567953 4089 ntBASIC5.69□□□□□ -1.5
COL6A2P12110 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
COL6A2P12110 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL6A2P12110 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL6A2P12110 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.68□□□□□ -1.5
COL6A2P12110 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL6A2P12110 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL6A2P12110 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL6A2P12110 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
COL6A2P12110 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL6A2P12110 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
COL6A2P12110 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
COL6A2P12110 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.68□□□□□ -1.5
COL6A2P12110 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL6A2P12110 OR10J6P-201ENST00000289731 930 ntBASIC5.68□□□□□ -1.5
COL6A2P12110 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL6A2P12110 RNU6-492P-201ENST00000363035 104 ntBASIC5.68□□□□□ -1.5
COL6A2P12110 RNU6-501P-201ENST00000364072 100 ntBASIC5.68□□□□□ -1.5
COL6A2P12110 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
COL6A2P12110 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.68□□□□□ -1.5
COL6A2P12110 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
COL6A2P12110 RNU6-348P-201ENST00000384386 107 ntBASIC5.68□□□□□ -1.5
COL6A2P12110 RNA5SP187-201ENST00000384400 119 ntBASIC5.68□□□□□ -1.5
COL6A2P12110 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
COL6A2P12110 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
COL6A2P12110 AL139098.1-201ENST00000407291 389 ntBASIC5.68□□□□□ -1.5
COL6A2P12110 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
COL6A2P12110 RPL30P16-201ENST00000419341 429 ntBASIC5.68□□□□□ -1.5
COL6A2P12110 RPL21P32-201ENST00000419877 477 ntBASIC5.68□□□□□ -1.5
COL6A2P12110 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC5.68□□□□□ -1.5
COL6A2P12110 AC062016.2-201ENST00000420950 676 ntBASIC5.68□□□□□ -1.5
COL6A2P12110 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.68□□□□□ -1.5
COL6A2P12110 AC104651.1-201ENST00000427559 735 ntBASIC5.68□□□□□ -1.5
COL6A2P12110 GAPDHP59-201ENST00000435908 267 ntBASIC5.68□□□□□ -1.5
COL6A2P12110 UBE2V1P3-201ENST00000439651 417 ntBASIC5.68□□□□□ -1.5
COL6A2P12110 LINC02210-201ENST00000444561 288 ntBASIC5.68□□□□□ -1.5
COL6A2P12110 RPL7P59-201ENST00000447700 943 ntBASIC5.68□□□□□ -1.5
COL6A2P12110 FGF7P6-202ENST00000451282 293 ntBASIC5.68□□□□□ -1.5
COL6A2P12110 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.68□□□□□ -1.5
COL6A2P12110 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL6A2P12110 AC108078.3-201ENST00000502633 489 ntBASIC5.68□□□□□ -1.5
COL6A2P12110 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.68□□□□□ -1.5
COL6A2P12110 AC109464.2-201ENST00000510242 943 ntBASIC5.68□□□□□ -1.5
COL6A2P12110 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC5.68□□□□□ -1.5
COL6A2P12110 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC5.68□□□□□ -1.5
COL6A2P12110 RNA5SP473-201ENST00000516402 125 ntBASIC5.68□□□□□ -1.5
COL6A2P12110 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.68□□□□□ -1.5
COL6A2P12110 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.68□□□□□ -1.5
COL6A2P12110 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.68□□□□□ -1.5
COL6A2P12110 AP000859.1-201ENST00000525536 307 ntBASIC5.68□□□□□ -1.5
COL6A2P12110 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC5.68□□□□□ -1.5
COL6A2P12110 AC087276.1-201ENST00000529659 480 ntBASIC5.68□□□□□ -1.5
COL6A2P12110 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.68□□□□□ -1.5
COL6A2P12110 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC5.68□□□□□ -1.5
COL6A2P12110 AC074029.1-201ENST00000552531 1044 ntBASIC5.68□□□□□ -1.5
COL6A2P12110 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC5.68□□□□□ -1.5
COL6A2P12110 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC5.68□□□□□ -1.5
COL6A2P12110 AC138915.2-201ENST00000569776 97 ntBASIC5.68□□□□□ -1.5
COL6A2P12110 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
COL6A2P12110 MIR4271-201ENST00000582451 67 ntBASIC5.68□□□□□ -1.5
COL6A2P12110 OR4G1P-201ENST00000588632 938 ntBASIC5.68□□□□□ -1.5
COL6A2P12110 AL357078.3-201ENST00000607528 618 ntBASIC5.68□□□□□ -1.5
COL6A2P12110 AL359091.2-201ENST00000609303 556 ntBASIC5.68□□□□□ -1.5
COL6A2P12110 AL589743.7-201ENST00000612637 233 ntBASIC5.68□□□□□ -1.5
COL6A2P12110 AC016769.4-201ENST00000616893 535 ntBASIC5.68□□□□□ -1.5
COL6A2P12110 MIR6133-201ENST00000617057 108 ntBASIC5.68□□□□□ -1.5
COL6A2P12110 U4.5-201ENST00000617137 123 ntBASIC5.68□□□□□ -1.5
COL6A2P12110 AC245014.3-201ENST00000618589 347 ntBASIC5.68□□□□□ -1.5
COL6A2P12110 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.68□□□□□ -1.5
COL6A2P12110 OR4F13P-202ENST00000560066 2054 ntBASIC5.68□□□□□ -1.5
COL6A2P12110 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL6A2P12110 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.68□□□□□ -1.5
COL6A2P12110 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL6A2P12110 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.68□□□□□ -1.5
COL6A2P12110 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.68□□□□□ -1.5
COL6A2P12110 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.68□□□□□ -1.5
COL6A2P12110 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
COL6A2P12110 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.67□□□□□ -1.5
COL6A2P12110 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
COL6A2P12110 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL6A2P12110 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
COL6A2P12110 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL6A2P12110 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL6A2P12110 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL6A2P12110 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.67□□□□□ -1.5
COL6A2P12110 AC093849.1-201ENST00000563631 2209 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL6A2P12110 PABPC1P9-201ENST00000426076 1612 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 AC004520.1-201ENST00000608362 1413 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.67□□□□□ -1.5
COL6A2P12110 TEX21P-201ENST00000447107 1476 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 AC092681.1-201ENST00000297369 291 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 AL121886.1-201ENST00000358609 435 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 RNU6-867P-201ENST00000364956 107 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL6A2P12110 RNU6-317P-201ENST00000384031 107 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 SNORA51.9-201ENST00000384295 124 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 ZNF603P-201ENST00000405613 487 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms