Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TOP2AP11388 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC6.88□□□□□ -1.31
TOP2AP11388 AC007068.1-201ENST00000396690 844 ntBASIC6.88□□□□□ -1.31
TOP2AP11388 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC6.88□□□□□ -1.31
TOP2AP11388 PPIAP3-201ENST00000450588 505 ntBASIC6.88□□□□□ -1.31
TOP2AP11388 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC6.88□□□□□ -1.31
TOP2AP11388 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.88□□□□□ -1.31
TOP2AP11388 AP002001.2-201ENST00000529025 1469 ntBASIC6.88□□□□□ -1.31
TOP2AP11388 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
TOP2AP11388 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
TOP2AP11388 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
TOP2AP11388 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
TOP2AP11388 PEX12P1-201ENST00000400284 1048 ntBASIC6.87□□□□□ -1.31
TOP2AP11388 GAS5-223ENST00000452197 483 ntTSL 3 BASIC6.87□□□□□ -1.31
TOP2AP11388 CDH12P2-201ENST00000504393 298 ntBASIC6.87□□□□□ -1.31
TOP2AP11388 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC6.87□□□□□ -1.31
TOP2AP11388 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.87□□□□□ -1.31
TOP2AP11388 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC6.87□□□□□ -1.31
TOP2AP11388 AC124312.6-202ENST00000623624 418 ntBASIC6.87□□□□□ -1.31
TOP2AP11388 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
TOP2AP11388 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TOP2AP11388 AL355596.1-201ENST00000565399 3996 ntBASIC6.87□□□□□ -1.31
TOP2AP11388 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TOP2AP11388 RNU6-525P-201ENST00000363685 104 ntBASIC6.86□□□□□ -1.31
TOP2AP11388 RPL7P4-203ENST00000430239 730 ntBASIC6.86□□□□□ -1.31
TOP2AP11388 AC106707.2-201ENST00000484182 374 ntBASIC6.86□□□□□ -1.31
TOP2AP11388 PANCR-201ENST00000503456 493 ntTSL 5 BASIC6.86□□□□□ -1.31
TOP2AP11388 WBP1LP4-201ENST00000505043 344 ntBASIC6.86□□□□□ -1.31
TOP2AP11388 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC6.86□□□□□ -1.31
TOP2AP11388 MIR7975-201ENST00000619350 68 ntBASIC6.86□□□□□ -1.31
TOP2AP11388 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.86□□□□□ -1.31
TOP2AP11388 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TOP2AP11388 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
TOP2AP11388 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
TOP2AP11388 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
TOP2AP11388 PAPPA-AS1-201ENST00000445861 2450 ntBASIC6.86□□□□□ -1.31
TOP2AP11388 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC6.86□□□□□ -1.31
TOP2AP11388 AL079305.1-201ENST00000623159 3008 ntBASIC6.86□□□□□ -1.31
TOP2AP11388 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TOP2AP11388 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
TOP2AP11388 MIR491-201ENST00000384877 84 ntBASIC6.86□□□□□ -1.31
TOP2AP11388 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC6.86□□□□□ -1.31
TOP2AP11388 AL390879.2-203ENST00000426943 1121 ntBASIC6.86□□□□□ -1.31
TOP2AP11388 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC6.86□□□□□ -1.31
TOP2AP11388 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
TOP2AP11388 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
TOP2AP11388 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TOP2AP11388 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.85□□□□□ -1.31
TOP2AP11388 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
TOP2AP11388 HSPD1P11-201ENST00000508643 1702 ntBASIC6.85□□□□□ -1.31
TOP2AP11388 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TOP2AP11388 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
TOP2AP11388 AL442067.2-201ENST00000614033 363 ntBASIC6.85□□□□□ -1.31
TOP2AP11388 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
TOP2AP11388 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TOP2AP11388 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
TOP2AP11388 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC6.84□□□□□ -1.31
TOP2AP11388 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TOP2AP11388 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TOP2AP11388 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC6.84□□□□□ -1.31
TOP2AP11388 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TOP2AP11388 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TOP2AP11388 SEPT7P8-201ENST00000413308 775 ntBASIC6.84□□□□□ -1.31
TOP2AP11388 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TOP2AP11388 MTND2P15-201ENST00000418575 892 ntBASIC6.84□□□□□ -1.31
TOP2AP11388 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TOP2AP11388 CYCSP4-201ENST00000429682 331 ntBASIC6.84□□□□□ -1.31
TOP2AP11388 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TOP2AP11388 RN7SL293P-201ENST00000481765 281 ntBASIC6.84□□□□□ -1.31
TOP2AP11388 PPP1R11P1-201ENST00000486095 376 ntBASIC6.84□□□□□ -1.31
TOP2AP11388 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TOP2AP11388 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
TOP2AP11388 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC6.84□□□□□ -1.31
TOP2AP11388 AL159169.3-201ENST00000608871 561 ntBASIC6.84□□□□□ -1.31
TOP2AP11388 AC079684.1-201ENST00000621405 437 ntBASIC6.84□□□□□ -1.31
TOP2AP11388 AC073346.2-201ENST00000624724 2058 ntBASIC6.84□□□□□ -1.31
TOP2AP11388 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC6.84□□□□□ -1.32
TOP2AP11388 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TOP2AP11388 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.83□□□□□ -1.32
TOP2AP11388 RNA5SP72-201ENST00000364442 117 ntBASIC6.83□□□□□ -1.32
TOP2AP11388 ESD-201ENST00000378697 1079 ntTSL 5 BASIC6.83□□□□□ -1.32
TOP2AP11388 MIR34B-201ENST00000385076 84 ntBASIC6.83□□□□□ -1.32
TOP2AP11388 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC6.83□□□□□ -1.32
TOP2AP11388 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC6.83□□□□□ -1.32
TOP2AP11388 ZNF736P2Y-201ENST00000416040 1279 ntBASIC6.83□□□□□ -1.32
TOP2AP11388 RPS3AP46-201ENST00000448352 682 ntBASIC6.83□□□□□ -1.32
TOP2AP11388 AC074250.1-201ENST00000511117 192 ntBASIC6.83□□□□□ -1.32
TOP2AP11388 RN7SKP18-201ENST00000516005 275 ntBASIC6.83□□□□□ -1.32
TOP2AP11388 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC6.83□□□□□ -1.32
TOP2AP11388 DUX4L52-201ENST00000549363 777 ntBASIC6.83□□□□□ -1.32
TOP2AP11388 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC6.83□□□□□ -1.32
TOP2AP11388 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC6.83□□□□□ -1.32
TOP2AP11388 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC6.83□□□□□ -1.32
TOP2AP11388 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TOP2AP11388 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TOP2AP11388 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TOP2AP11388 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TOP2AP11388 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
TOP2AP11388 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC6.82□□□□□ -1.32
TOP2AP11388 RPS29P4-201ENST00000414733 161 ntBASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms