Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
MMP3P08254 AC234772.1-201ENST00000377927 937 ntBASIC5.11□□□□□ -1.59
MMP3P08254 SNORA5.1-201ENST00000384275 131 ntBASIC5.11□□□□□ -1.59
MMP3P08254 AL603865.2-201ENST00000401679 213 ntBASIC5.11□□□□□ -1.59
MMP3P08254 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.11□□□□□ -1.59
MMP3P08254 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
MMP3P08254 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.11□□□□□ -1.59
MMP3P08254 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.11□□□□□ -1.59
MMP3P08254 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
MMP3P08254 AC008173.1-201ENST00000418901 264 ntBASIC5.11□□□□□ -1.59
MMP3P08254 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.11□□□□□ -1.59
MMP3P08254 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.11□□□□□ -1.59
MMP3P08254 AC093422.3-201ENST00000428506 305 ntBASIC5.11□□□□□ -1.59
MMP3P08254 AP001324.1-201ENST00000428553 399 ntBASIC5.11□□□□□ -1.59
MMP3P08254 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.11□□□□□ -1.59
MMP3P08254 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.11□□□□□ -1.59
MMP3P08254 RPS29P17-201ENST00000430795 166 ntBASIC5.11□□□□□ -1.59
MMP3P08254 RPS7P2-201ENST00000435134 607 ntBASIC5.11□□□□□ -1.59
MMP3P08254 AC004938.1-201ENST00000438468 308 ntBASIC5.11□□□□□ -1.59
MMP3P08254 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.11□□□□□ -1.59
MMP3P08254 AL139824.2-201ENST00000458731 1095 ntBASIC5.11□□□□□ -1.59
MMP3P08254 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.11□□□□□ -1.59
MMP3P08254 CDH12P2-201ENST00000504393 298 ntBASIC5.11□□□□□ -1.59
MMP3P08254 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.11□□□□□ -1.59
MMP3P08254 AC010376.1-201ENST00000522101 334 ntBASIC5.11□□□□□ -1.59
MMP3P08254 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.11□□□□□ -1.59
MMP3P08254 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.11□□□□□ -1.59
MMP3P08254 AC124283.4-201ENST00000581815 456 ntBASIC5.11□□□□□ -1.59
MMP3P08254 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.11□□□□□ -1.59
MMP3P08254 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.11□□□□□ -1.59
MMP3P08254 AC010857.1-201ENST00000606398 594 ntBASIC5.11□□□□□ -1.59
MMP3P08254 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.11□□□□□ -1.59
MMP3P08254 AC114781.5-201ENST00000615297 108 ntBASIC5.11□□□□□ -1.59
MMP3P08254 CYCSP41-201ENST00000616920 296 ntBASIC5.11□□□□□ -1.59
MMP3P08254 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
MMP3P08254 OR6C71P-202ENST00000641886 1107 ntBASIC5.11□□□□□ -1.59
MMP3P08254 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.11□□□□□ -1.59
MMP3P08254 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
MMP3P08254 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
MMP3P08254 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
MMP3P08254 AL445487.1-201ENST00000415694 1580 ntBASIC5.11□□□□□ -1.59
MMP3P08254 AL391684.1-202ENST00000641293 1636 ntBASIC5.11□□□□□ -1.59
MMP3P08254 AL603750.1-201ENST00000624216 1717 ntBASIC5.11□□□□□ -1.59
MMP3P08254 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.11□□□□□ -1.59
MMP3P08254 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.11□□□□□ -1.59
MMP3P08254 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.11□□□□□ -1.59
MMP3P08254 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.11□□□□□ -1.59
MMP3P08254 AC133552.1-201ENST00000569988 4007 ntBASIC5.11□□□□□ -1.59
MMP3P08254 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
MMP3P08254 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
MMP3P08254 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
MMP3P08254 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
MMP3P08254 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
MMP3P08254 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
MMP3P08254 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
MMP3P08254 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
MMP3P08254 MT-TP-201ENST00000387461 68 ntBASIC5.1□□□□□ -1.59
MMP3P08254 RNU6-244P-201ENST00000391028 104 ntBASIC5.1□□□□□ -1.59
MMP3P08254 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.1□□□□□ -1.59
MMP3P08254 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.1□□□□□ -1.59
MMP3P08254 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
MMP3P08254 EIF4HP2-201ENST00000424380 563 ntBASIC5.1□□□□□ -1.59
MMP3P08254 HMGB3P5-201ENST00000428894 612 ntBASIC5.1□□□□□ -1.59
MMP3P08254 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.1□□□□□ -1.59
MMP3P08254 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.1□□□□□ -1.59
MMP3P08254 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.1□□□□□ -1.59
MMP3P08254 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.1□□□□□ -1.59
MMP3P08254 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.1□□□□□ -1.59
MMP3P08254 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.1□□□□□ -1.59
MMP3P08254 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC5.1□□□□□ -1.59
MMP3P08254 CYCSP34-201ENST00000458172 304 ntBASIC5.1□□□□□ -1.59
MMP3P08254 RN7SL303P-201ENST00000469773 251 ntBASIC5.1□□□□□ -1.59
MMP3P08254 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
MMP3P08254 RN7SL810P-201ENST00000493031 276 ntBASIC5.1□□□□□ -1.59
MMP3P08254 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.1□□□□□ -1.59
MMP3P08254 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.1□□□□□ -1.59
MMP3P08254 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.1□□□□□ -1.59
MMP3P08254 AC091163.3-201ENST00000518269 1144 ntBASIC5.1□□□□□ -1.59
MMP3P08254 AC134698.5-201ENST00000519444 336 ntBASIC5.1□□□□□ -1.59
MMP3P08254 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.1□□□□□ -1.59
MMP3P08254 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC5.1□□□□□ -1.59
MMP3P08254 CYB5AP5-201ENST00000549779 389 ntBASIC5.1□□□□□ -1.59
MMP3P08254 AL109766.1-201ENST00000555080 552 ntBASIC5.1□□□□□ -1.59
MMP3P08254 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC5.1□□□□□ -1.59
MMP3P08254 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.1□□□□□ -1.59
MMP3P08254 AC010735.1-201ENST00000567305 1026 ntBASIC5.1□□□□□ -1.59
MMP3P08254 RN7SL622P-201ENST00000585292 275 ntBASIC5.1□□□□□ -1.59
MMP3P08254 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC5.1□□□□□ -1.59
MMP3P08254 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.1□□□□□ -1.59
MMP3P08254 BNIP3P38-201ENST00000601117 544 ntBASIC5.1□□□□□ -1.59
MMP3P08254 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.1□□□□□ -1.59
MMP3P08254 TCP11X1-202ENST00000622971 1372 ntBASIC5.1□□□□□ -1.59
MMP3P08254 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
MMP3P08254 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.1□□□□□ -1.59
MMP3P08254 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
MMP3P08254 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
MMP3P08254 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
MMP3P08254 AP000756.2-201ENST00000624168 2567 ntBASIC5.1□□□□□ -1.59
MMP3P08254 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.59
MMP3P08254 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms