Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC021851.1-201ENST00000608537 1082 ntBASIC5.04□□□□□ -1.6
RB1P06400 AP005229.2-201ENST00000609980 697 ntBASIC5.04□□□□□ -1.6
RB1P06400 AC012409.3-201ENST00000611343 981 ntBASIC5.04□□□□□ -1.6
RB1P06400 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RB1P06400 U3.53-201ENST00000628922 216 ntBASIC5.04□□□□□ -1.6
RB1P06400 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
RB1P06400 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.04□□□□□ -1.6
RB1P06400 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.04□□□□□ -1.6
RB1P06400 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RB1P06400 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.04□□□□□ -1.6
RB1P06400 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.04□□□□□ -1.6
RB1P06400 AC017007.4-201ENST00000503353 1352 ntBASIC5.04□□□□□ -1.6
RB1P06400 SALL4P2-201ENST00000423288 2910 ntBASIC5.03□□□□□ -1.6
RB1P06400 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RB1P06400 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.03□□□□□ -1.6
RB1P06400 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RB1P06400 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.03□□□□□ -1.6
RB1P06400 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RB1P06400 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
RB1P06400 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.03□□□□□ -1.6
RB1P06400 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
RB1P06400 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RB1P06400 VTA1P1-201ENST00000414044 866 ntBASIC5.03□□□□□ -1.6
RB1P06400 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.03□□□□□ -1.6
RB1P06400 TMBIM7P-201ENST00000418074 855 ntBASIC5.03□□□□□ -1.6
RB1P06400 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RB1P06400 RPS6P14-201ENST00000425165 719 ntBASIC5.03□□□□□ -1.6
RB1P06400 AL158073.1-201ENST00000426848 1104 ntBASIC5.03□□□□□ -1.6
RB1P06400 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.03□□□□□ -1.6
RB1P06400 AC092162.1-201ENST00000432828 434 ntBASIC5.03□□□□□ -1.6
RB1P06400 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.03□□□□□ -1.6
RB1P06400 TMX2P1-201ENST00000436507 708 ntBASIC5.03□□□□□ -1.6
RB1P06400 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.03□□□□□ -1.6
RB1P06400 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.03□□□□□ -1.6
RB1P06400 AC122718.1-201ENST00000439448 744 ntBASIC5.03□□□□□ -1.6
RB1P06400 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.03□□□□□ -1.6
RB1P06400 AL354710.1-201ENST00000453641 246 ntBASIC5.03□□□□□ -1.6
RB1P06400 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.03□□□□□ -1.6
RB1P06400 FAM133DP-201ENST00000464802 691 ntBASIC5.03□□□□□ -1.6
RB1P06400 AC021660.1-201ENST00000465006 554 ntBASIC5.03□□□□□ -1.6
RB1P06400 METTL15P1-201ENST00000481421 1045 ntBASIC5.03□□□□□ -1.6
RB1P06400 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.03□□□□□ -1.6
RB1P06400 RPS27AP16-201ENST00000492222 470 ntBASIC5.03□□□□□ -1.6
RB1P06400 AC010627.1-201ENST00000503819 1294 ntBASIC5.03□□□□□ -1.6
RB1P06400 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.03□□□□□ -1.6
RB1P06400 MTCO3P27-201ENST00000514397 196 ntBASIC5.03□□□□□ -1.6
RB1P06400 MIR2116-201ENST00000517221 80 ntBASIC5.03□□□□□ -1.6
RB1P06400 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RB1P06400 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RB1P06400 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.03□□□□□ -1.6
RB1P06400 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.03□□□□□ -1.6
RB1P06400 AC069366.1-201ENST00000583159 838 ntBASIC5.03□□□□□ -1.6
RB1P06400 PRPF19P1-201ENST00000584766 898 ntBASIC5.03□□□□□ -1.6
RB1P06400 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.03□□□□□ -1.6
RB1P06400 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.03□□□□□ -1.6
RB1P06400 AC012254.4-201ENST00000588843 273 ntBASIC5.03□□□□□ -1.6
RB1P06400 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.03□□□□□ -1.6
RB1P06400 OR2BH1P-201ENST00000608850 864 ntBASIC5.03□□□□□ -1.6
RB1P06400 AL392048.1-201ENST00000613946 534 ntBASIC5.03□□□□□ -1.6
RB1P06400 MIR7973-1-201ENST00000614683 76 ntBASIC5.03□□□□□ -1.6
RB1P06400 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.03□□□□□ -1.6
RB1P06400 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
RB1P06400 DDX18P4-201ENST00000511690 1966 ntBASIC5.03□□□□□ -1.6
RB1P06400 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RB1P06400 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.03□□□□□ -1.6
RB1P06400 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
RB1P06400 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RB1P06400 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
RB1P06400 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
RB1P06400 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RB1P06400 AC025031.4-201ENST00000621248 3271 ntBASIC5.03□□□□□ -1.6
RB1P06400 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RB1P06400 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RB1P06400 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RB1P06400 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RB1P06400 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RB1P06400 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RB1P06400 MFSD8-242ENST00000641690 4199 ntBASIC5.02□□□□□ -1.61
RB1P06400 AC009313.2-201ENST00000417893 1941 ntBASIC5.02□□□□□ -1.61
RB1P06400 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.02□□□□□ -1.61
RB1P06400 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RB1P06400 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RB1P06400 RNU6-304P-201ENST00000364855 107 ntBASIC5.02□□□□□ -1.61
RB1P06400 RNU1-64P-201ENST00000365443 163 ntBASIC5.02□□□□□ -1.61
RB1P06400 SDHCP2-201ENST00000398565 501 ntBASIC5.02□□□□□ -1.61
RB1P06400 AC013404.1-201ENST00000413068 249 ntBASIC5.02□□□□□ -1.61
RB1P06400 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.02□□□□□ -1.61
RB1P06400 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.02□□□□□ -1.61
RB1P06400 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.02□□□□□ -1.61
RB1P06400 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RB1P06400 MRPL50P1-201ENST00000431951 384 ntBASIC5.02□□□□□ -1.61
RB1P06400 AC006994.1-201ENST00000438212 839 ntBASIC5.02□□□□□ -1.61
RB1P06400 AC073052.1-201ENST00000440417 714 ntBASIC5.02□□□□□ -1.61
RB1P06400 HMGN1P5-201ENST00000448591 263 ntBASIC5.02□□□□□ -1.61
RB1P06400 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.02□□□□□ -1.61
RB1P06400 AC005229.2-201ENST00000456995 399 ntBASIC5.02□□□□□ -1.61
RB1P06400 RPL21P129-201ENST00000491732 478 ntBASIC5.02□□□□□ -1.61
RB1P06400 NAMPTP2-201ENST00000505629 1115 ntBASIC5.02□□□□□ -1.61
RB1P06400 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.02□□□□□ -1.61
RB1P06400 MTCO1P35-201ENST00000515270 228 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms