Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
CHGBP05060 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
CHGBP05060 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHGBP05060 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHGBP05060 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHGBP05060 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CHGBP05060 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.07□□□□□ -1.44
CHGBP05060 RNU5A-2P-201ENST00000384337 116 ntBASIC6.07□□□□□ -1.44
CHGBP05060 Y_RNA.560-201ENST00000384689 102 ntBASIC6.07□□□□□ -1.44
CHGBP05060 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC6.07□□□□□ -1.44
CHGBP05060 BTF3P9-201ENST00000418784 283 ntBASIC6.07□□□□□ -1.44
CHGBP05060 AC234781.4-201ENST00000419384 244 ntBASIC6.07□□□□□ -1.44
CHGBP05060 OR2AM1P-201ENST00000422137 422 ntBASIC6.07□□□□□ -1.44
CHGBP05060 AC019178.2-201ENST00000423595 505 ntBASIC6.07□□□□□ -1.44
CHGBP05060 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC6.07□□□□□ -1.44
CHGBP05060 MTND1P32-201ENST00000433043 938 ntBASIC6.07□□□□□ -1.44
CHGBP05060 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.07□□□□□ -1.44
CHGBP05060 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC6.07□□□□□ -1.44
CHGBP05060 TXNP5-201ENST00000441043 315 ntBASIC6.07□□□□□ -1.44
CHGBP05060 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC6.07□□□□□ -1.44
CHGBP05060 RPS17P2-201ENST00000461663 408 ntBASIC6.07□□□□□ -1.44
CHGBP05060 SRRM1P2-201ENST00000464531 1192 ntBASIC6.07□□□□□ -1.44
CHGBP05060 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC6.07□□□□□ -1.44
CHGBP05060 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC6.07□□□□□ -1.44
CHGBP05060 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CHGBP05060 AC010424.1-201ENST00000506336 297 ntBASIC6.07□□□□□ -1.44
CHGBP05060 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC6.07□□□□□ -1.44
CHGBP05060 RNU2-30P-201ENST00000516209 141 ntBASIC6.07□□□□□ -1.44
CHGBP05060 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.07□□□□□ -1.44
CHGBP05060 AL121766.1-201ENST00000547436 487 ntBASIC6.07□□□□□ -1.44
CHGBP05060 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.07□□□□□ -1.44
CHGBP05060 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC6.07□□□□□ -1.44
CHGBP05060 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC6.07□□□□□ -1.44
CHGBP05060 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CHGBP05060 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.07□□□□□ -1.44
CHGBP05060 AL031985.2-201ENST00000600955 480 ntBASIC6.07□□□□□ -1.44
CHGBP05060 AC006539.2-201ENST00000601729 572 ntBASIC6.07□□□□□ -1.44
CHGBP05060 AL355073.2-201ENST00000612106 557 ntBASIC6.07□□□□□ -1.44
CHGBP05060 AC037198.3-201ENST00000616754 526 ntBASIC6.07□□□□□ -1.44
CHGBP05060 AC073968.1-201ENST00000618594 637 ntBASIC6.07□□□□□ -1.44
CHGBP05060 AC091932.2-201ENST00000623014 291 ntBASIC6.07□□□□□ -1.44
CHGBP05060 AL359757.1-201ENST00000623176 255 ntBASIC6.07□□□□□ -1.44
CHGBP05060 AC092656.1-203ENST00000624134 423 ntBASIC6.07□□□□□ -1.44
CHGBP05060 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.07□□□□□ -1.44
CHGBP05060 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.07□□□□□ -1.44
CHGBP05060 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHGBP05060 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHGBP05060 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHGBP05060 AC006042.3-201ENST00000454684 1469 ntBASIC6.07□□□□□ -1.44
CHGBP05060 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHGBP05060 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHGBP05060 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CHGBP05060 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHGBP05060 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHGBP05060 AC003985.2-201ENST00000562268 1669 ntBASIC6.07□□□□□ -1.44
CHGBP05060 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHGBP05060 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHGBP05060 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.07□□□□□ -1.44
CHGBP05060 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.07□□□□□ -1.44
CHGBP05060 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
CHGBP05060 AC111188.2-201ENST00000529697 1387 ntBASIC6.06□□□□□ -1.44
CHGBP05060 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CHGBP05060 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.06□□□□□ -1.44
CHGBP05060 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC6.06□□□□□ -1.44
CHGBP05060 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CHGBP05060 RNU6-517P-201ENST00000384362 110 ntBASIC6.06□□□□□ -1.44
CHGBP05060 SNORD65C-201ENST00000390962 71 ntBASIC6.06□□□□□ -1.44
CHGBP05060 ATP5HP3-201ENST00000396994 486 ntBASIC6.06□□□□□ -1.44
CHGBP05060 C8orf59P1-201ENST00000429930 303 ntBASIC6.06□□□□□ -1.44
CHGBP05060 SCP2-206ENST00000430330 938 ntTSL 2 BASIC6.06□□□□□ -1.44
CHGBP05060 AL354941.1-201ENST00000438600 464 ntBASIC6.06□□□□□ -1.44
CHGBP05060 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CHGBP05060 AC097262.1-201ENST00000452559 548 ntBASIC6.06□□□□□ -1.44
CHGBP05060 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC6.06□□□□□ -1.44
CHGBP05060 HMGB1P4-201ENST00000455362 567 ntBASIC6.06□□□□□ -1.44
CHGBP05060 AC091544.1-201ENST00000484702 348 ntBASIC6.06□□□□□ -1.44
CHGBP05060 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC6.06□□□□□ -1.44
CHGBP05060 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC6.06□□□□□ -1.44
CHGBP05060 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.06□□□□□ -1.44
CHGBP05060 AC021146.8-201ENST00000507455 733 ntBASIC6.06□□□□□ -1.44
CHGBP05060 COX6B1P5-201ENST00000509843 249 ntBASIC6.06□□□□□ -1.44
CHGBP05060 AC020937.1-201ENST00000519677 1013 ntBASIC6.06□□□□□ -1.44
CHGBP05060 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.06□□□□□ -1.44
CHGBP05060 AP001804.2-201ENST00000533932 910 ntBASIC6.06□□□□□ -1.44
CHGBP05060 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC6.06□□□□□ -1.44
CHGBP05060 PYM1-205ENST00000547925 499 ntTSL 3 BASIC6.06□□□□□ -1.44
CHGBP05060 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC6.06□□□□□ -1.44
CHGBP05060 ZNF415P1-201ENST00000582279 1166 ntBASIC6.06□□□□□ -1.44
CHGBP05060 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.06□□□□□ -1.44
CHGBP05060 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC6.06□□□□□ -1.44
CHGBP05060 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC6.06□□□□□ -1.44
CHGBP05060 AP002360.4-201ENST00000606980 481 ntBASIC6.06□□□□□ -1.44
CHGBP05060 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC6.06□□□□□ -1.44
CHGBP05060 AL158063.1-201ENST00000615349 536 ntBASIC6.06□□□□□ -1.44
CHGBP05060 NCLP2-201ENST00000416078 1462 ntBASIC6.06□□□□□ -1.44
CHGBP05060 OFD1P9Y-201ENST00000417699 1491 ntBASIC6.06□□□□□ -1.44
CHGBP05060 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CHGBP05060 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CHGBP05060 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.06□□□□□ -1.44
CHGBP05060 CR381670.1-201ENST00000624291 1693 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms