Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.79□□□□□ -1.8
SPTA1P02549 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SPTA1P02549 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SPTA1P02549 AL450992.3-201ENST00000413192 568 ntBASIC3.79□□□□□ -1.8
SPTA1P02549 BX510359.1-201ENST00000456973 237 ntBASIC3.79□□□□□ -1.8
SPTA1P02549 RPS26P28-201ENST00000470806 348 ntBASIC3.79□□□□□ -1.8
SPTA1P02549 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SPTA1P02549 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.79□□□□□ -1.8
SPTA1P02549 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SPTA1P02549 AC006349.1-201ENST00000555526 235 ntBASIC3.79□□□□□ -1.8
SPTA1P02549 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
SPTA1P02549 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.79□□□□□ -1.8
SPTA1P02549 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC3.79□□□□□ -1.8
SPTA1P02549 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.79□□□□□ -1.8
SPTA1P02549 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SPTA1P02549 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SPTA1P02549 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SPTA1P02549 AC104623.2-202ENST00000623477 4002 ntBASIC3.78□□□□□ -1.8
SPTA1P02549 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SPTA1P02549 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SPTA1P02549 OSBPL9P1-201ENST00000604744 1469 ntBASIC3.78□□□□□ -1.8
SPTA1P02549 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SPTA1P02549 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.78□□□□□ -1.8
SPTA1P02549 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.78□□□□□ -1.8
SPTA1P02549 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.78□□□□□ -1.8
SPTA1P02549 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC3.78□□□□□ -1.8
SPTA1P02549 AC010680.3-201ENST00000604215 520 ntBASIC3.78□□□□□ -1.8
SPTA1P02549 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SPTA1P02549 AC006971.1-201ENST00000407916 4486 ntBASIC3.78□□□□□ -1.8
SPTA1P02549 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.78□□□□□ -1.8
SPTA1P02549 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
SPTA1P02549 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
SPTA1P02549 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC3.78□□□□□ -1.8
SPTA1P02549 AC093297.3-201ENST00000607056 2517 ntBASIC3.78□□□□□ -1.81
SPTA1P02549 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
SPTA1P02549 OR8F1P-201ENST00000425243 930 ntBASIC3.78□□□□□ -1.81
SPTA1P02549 RN7SL293P-201ENST00000481765 281 ntBASIC3.78□□□□□ -1.81
SPTA1P02549 RPL5P23-201ENST00000496040 868 ntBASIC3.78□□□□□ -1.81
SPTA1P02549 RNA5SP360-201ENST00000516555 118 ntBASIC3.78□□□□□ -1.81
SPTA1P02549 AC006064.5-201ENST00000541782 248 ntBASIC3.78□□□□□ -1.81
SPTA1P02549 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.78□□□□□ -1.81
SPTA1P02549 AC011816.2-201ENST00000607089 556 ntBASIC3.78□□□□□ -1.81
SPTA1P02549 Z98200.1-201ENST00000607298 470 ntBASIC3.78□□□□□ -1.81
SPTA1P02549 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.78□□□□□ -1.81
SPTA1P02549 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SPTA1P02549 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SPTA1P02549 MIR490-201ENST00000384865 128 ntBASIC3.77□□□□□ -1.81
SPTA1P02549 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SPTA1P02549 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC3.77□□□□□ -1.81
SPTA1P02549 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC3.77□□□□□ -1.81
SPTA1P02549 AL451050.1-201ENST00000450126 415 ntBASIC3.77□□□□□ -1.81
SPTA1P02549 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.77□□□□□ -1.81
SPTA1P02549 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.77□□□□□ -1.81
SPTA1P02549 GTF2IP22-201ENST00000554443 182 ntBASIC3.77□□□□□ -1.81
SPTA1P02549 EIF4BP1-201ENST00000554881 351 ntBASIC3.77□□□□□ -1.81
SPTA1P02549 MTCO3P22-201ENST00000603219 784 ntBASIC3.77□□□□□ -1.81
SPTA1P02549 AC013412.1-201ENST00000610687 192 ntBASIC3.77□□□□□ -1.81
SPTA1P02549 AL645927.2-201ENST00000618350 349 ntBASIC3.77□□□□□ -1.81
SPTA1P02549 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.77□□□□□ -1.81
SPTA1P02549 AP001642.1-201ENST00000624727 2117 ntBASIC3.77□□□□□ -1.81
SPTA1P02549 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC3.77□□□□□ -1.81
SPTA1P02549 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SPTA1P02549 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC3.77□□□□□ -1.81
SPTA1P02549 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SPTA1P02549 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SPTA1P02549 AL449283.1-201ENST00000602631 3403 ntBASIC3.77□□□□□ -1.81
SPTA1P02549 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.76□□□□□ -1.81
SPTA1P02549 GLS-204ENST00000409428 816 ntTSL 2 BASIC3.76□□□□□ -1.81
SPTA1P02549 RPL36AP13-201ENST00000457490 317 ntBASIC3.76□□□□□ -1.81
SPTA1P02549 RN7SL271P-201ENST00000487601 295 ntBASIC3.76□□□□□ -1.81
SPTA1P02549 UBE2CP3-201ENST00000502715 450 ntBASIC3.76□□□□□ -1.81
SPTA1P02549 HPRT1P2-201ENST00000505250 544 ntBASIC3.76□□□□□ -1.81
SPTA1P02549 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SPTA1P02549 DEFB109D-201ENST00000529497 240 ntBASIC3.76□□□□□ -1.81
SPTA1P02549 RPL23AP97-201ENST00000568955 471 ntBASIC3.76□□□□□ -1.81
SPTA1P02549 AC015726.1-201ENST00000602353 681 ntBASIC3.76□□□□□ -1.81
SPTA1P02549 AF001550.2-201ENST00000636643 217 ntBASIC3.76□□□□□ -1.81
SPTA1P02549 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.76□□□□□ -1.81
SPTA1P02549 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.76□□□□□ -1.81
SPTA1P02549 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
SPTA1P02549 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SPTA1P02549 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC3.76□□□□□ -1.81
SPTA1P02549 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.76□□□□□ -1.81
SPTA1P02549 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
SPTA1P02549 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
SPTA1P02549 NXPH1-205ENST00000602349 1953 ntBASIC3.76□□□□□ -1.81
SPTA1P02549 GVINP1-202ENST00000531871 7271 ntBASIC3.76□□□□□ -1.81
SPTA1P02549 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SPTA1P02549 RNA5SP307-201ENST00000362863 116 ntBASIC3.76□□□□□ -1.81
SPTA1P02549 MIR1179-201ENST00000408703 91 ntBASIC3.76□□□□□ -1.81
SPTA1P02549 AC245052.5-201ENST00000416320 649 ntBASIC3.76□□□□□ -1.81
SPTA1P02549 RPL23AP81-201ENST00000455252 467 ntBASIC3.76□□□□□ -1.81
SPTA1P02549 AC139783.2-201ENST00000504847 1145 ntBASIC3.76□□□□□ -1.81
SPTA1P02549 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.76□□□□□ -1.81
SPTA1P02549 MIR4769-201ENST00000584126 77 ntBASIC3.76□□□□□ -1.81
SPTA1P02549 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
SPTA1P02549 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
SPTA1P02549 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.76□□□□□ -1.81
SPTA1P02549 ERCC6-202ENST00000374127 1782 ntBASIC3.76□□□□□ -1.81
SPTA1P02549 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms