Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.3□□□□□ -1.88
HLA-DQA1P01909 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
HLA-DQA1P01909 AC068714.1-201ENST00000559623 800 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DQA1P01909 AC087763.1-201ENST00000603391 286 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 AL160290.3-201ENST00000604869 165 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC3.3□□□□□ -1.88
HLA-DQA1P01909 AC007497.1-201ENST00000610421 561 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 CR589904.2-201ENST00000612533 440 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 MIR7702-201ENST00000621931 59 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 AP002799.1-201ENST00000623552 423 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 AC138907.10-201ENST00000623708 983 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 AL118508.4-201ENST00000624142 1176 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.3□□□□□ -1.88
HLA-DQA1P01909 AC099654.2-201ENST00000433031 1980 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 ARHGAP42P1-201ENST00000507474 1976 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 Z82217.1-201ENST00000625157 8149 ntBASIC3.3□□□□□ -1.88
HLA-DQA1P01909 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DQA1P01909 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.29□□□□□ -1.88
HLA-DQA1P01909 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
HLA-DQA1P01909 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC3.29□□□□□ -1.88
HLA-DQA1P01909 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.29□□□□□ -1.88
HLA-DQA1P01909 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DQA1P01909 AC109780.1-201ENST00000451768 1344 ntBASIC3.29□□□□□ -1.88
HLA-DQA1P01909 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DQA1P01909 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
HLA-DQA1P01909 AC011155.1-201ENST00000316512 456 ntBASIC3.29□□□□□ -1.88
HLA-DQA1P01909 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.29□□□□□ -1.88
HLA-DQA1P01909 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
HLA-DQA1P01909 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
HLA-DQA1P01909 MIR765-201ENST00000390226 114 ntBASIC3.29□□□□□ -1.88
HLA-DQA1P01909 CCNB2P1-201ENST00000399411 1150 ntBASIC3.29□□□□□ -1.88
HLA-DQA1P01909 Z86062.1-201ENST00000406773 777 ntBASIC3.29□□□□□ -1.88
HLA-DQA1P01909 RNU2-50P-201ENST00000410494 143 ntBASIC3.29□□□□□ -1.88
HLA-DQA1P01909 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DQA1P01909 MTND4LP7-201ENST00000431728 294 ntBASIC3.29□□□□□ -1.88
HLA-DQA1P01909 RHOT1P3-201ENST00000436571 331 ntBASIC3.29□□□□□ -1.88
HLA-DQA1P01909 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DQA1P01909 XKRY2-201ENST00000442362 1093 ntBASIC3.29□□□□□ -1.88
HLA-DQA1P01909 AC023512.1-201ENST00000444513 499 ntBASIC3.29□□□□□ -1.88
HLA-DQA1P01909 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DQA1P01909 AC026348.1-201ENST00000462549 1053 ntBASIC3.29□□□□□ -1.88
HLA-DQA1P01909 TSACC-207ENST00000470342 601 ntTSL 2 BASIC3.29□□□□□ -1.88
HLA-DQA1P01909 RPL7AP6-201ENST00000477943 801 ntBASIC3.29□□□□□ -1.88
HLA-DQA1P01909 PRELID3BP7-201ENST00000503606 469 ntBASIC3.29□□□□□ -1.88
HLA-DQA1P01909 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DQA1P01909 RNA5SP143-201ENST00000516936 115 ntBASIC3.29□□□□□ -1.88
HLA-DQA1P01909 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.29□□□□□ -1.88
HLA-DQA1P01909 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DQA1P01909 AC090819.1-201ENST00000523800 1111 ntBASIC3.29□□□□□ -1.88
HLA-DQA1P01909 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.29□□□□□ -1.88
HLA-DQA1P01909 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DQA1P01909 AC044860.2-201ENST00000561005 179 ntBASIC3.29□□□□□ -1.88
HLA-DQA1P01909 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DQA1P01909 AC022884.3-201ENST00000579571 248 ntBASIC3.29□□□□□ -1.88
HLA-DQA1P01909 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DQA1P01909 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DQA1P01909 AC005034.4-201ENST00000603612 899 ntBASIC3.29□□□□□ -1.88
HLA-DQA1P01909 MEMO1P5-201ENST00000604810 406 ntBASIC3.29□□□□□ -1.88
HLA-DQA1P01909 AL391358.1-201ENST00000605342 190 ntBASIC3.29□□□□□ -1.88
HLA-DQA1P01909 AC242628.1-201ENST00000606810 391 ntBASIC3.29□□□□□ -1.88
HLA-DQA1P01909 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DQA1P01909 AL627230.1-201ENST00000613077 211 ntBASIC3.29□□□□□ -1.88
HLA-DQA1P01909 AC003001.2-201ENST00000616294 831 ntBASIC3.29□□□□□ -1.88
HLA-DQA1P01909 AC016957.2-201ENST00000616998 848 ntBASIC3.29□□□□□ -1.88
HLA-DQA1P01909 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DQA1P01909 AL162233.1-201ENST00000620014 944 ntBASIC3.29□□□□□ -1.88
HLA-DQA1P01909 AP003497.2-201ENST00000624220 967 ntBASIC3.29□□□□□ -1.88
HLA-DQA1P01909 LINC01739-205ENST00000641890 573 ntBASIC3.29□□□□□ -1.88
HLA-DQA1P01909 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DQA1P01909 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DQA1P01909 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
HLA-DQA1P01909 AC092079.1-201ENST00000558620 1985 ntBASIC3.29□□□□□ -1.88
HLA-DQA1P01909 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DQA1P01909 AL442639.1-201ENST00000625030 1899 ntBASIC3.28□□□□□ -1.88
HLA-DQA1P01909 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.28□□□□□ -1.88
HLA-DQA1P01909 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DQA1P01909 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DQA1P01909 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
HLA-DQA1P01909 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DQA1P01909 CPHL1P-201ENST00000461341 3407 ntBASIC3.28□□□□□ -1.88
HLA-DQA1P01909 AC009501.3-201ENST00000605001 1352 ntBASIC3.28□□□□□ -1.88
HLA-DQA1P01909 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DQA1P01909 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DQA1P01909 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DQA1P01909 CCT8P1-201ENST00000413611 1657 ntBASIC3.28□□□□□ -1.88
HLA-DQA1P01909 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DQA1P01909 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DQA1P01909 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DQA1P01909 RNA5SP332-201ENST00000391063 115 ntBASIC3.28□□□□□ -1.88
HLA-DQA1P01909 CHMP1B2P-201ENST00000399581 597 ntBASIC3.28□□□□□ -1.88
HLA-DQA1P01909 OR1F12-201ENST00000402365 945 ntBASIC3.28□□□□□ -1.88
HLA-DQA1P01909 RPS27AP11-201ENST00000402798 447 ntBASIC3.28□□□□□ -1.88
HLA-DQA1P01909 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DQA1P01909 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.28□□□□□ -1.88
HLA-DQA1P01909 CR848007.2-201ENST00000424918 787 ntBASIC3.28□□□□□ -1.88
HLA-DQA1P01909 RPS26P47-201ENST00000427219 348 ntBASIC3.28□□□□□ -1.88
HLA-DQA1P01909 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DQA1P01909 RPS6P12-201ENST00000432491 726 ntBASIC3.28□□□□□ -1.88
HLA-DQA1P01909 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms