Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.27□□□□□ -1.57
VPS4BO75351 DPRXP4-201ENST00000578053 568 ntBASIC5.27□□□□□ -1.57
VPS4BO75351 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.27□□□□□ -1.57
VPS4BO75351 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC5.27□□□□□ -1.57
VPS4BO75351 MIR4999-201ENST00000585029 91 ntBASIC5.27□□□□□ -1.57
VPS4BO75351 AC025165.5-201ENST00000602802 578 ntBASIC5.27□□□□□ -1.57
VPS4BO75351 SUGT1P3-202ENST00000604259 383 ntBASIC5.27□□□□□ -1.57
VPS4BO75351 AC244107.2-201ENST00000611773 76 ntBASIC5.27□□□□□ -1.57
VPS4BO75351 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
VPS4BO75351 AC092608.3-201ENST00000625017 386 ntBASIC5.27□□□□□ -1.57
VPS4BO75351 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.27□□□□□ -1.57
VPS4BO75351 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VPS4BO75351 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
VPS4BO75351 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.27□□□□□ -1.57
VPS4BO75351 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS4BO75351 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS4BO75351 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VPS4BO75351 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VPS4BO75351 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS4BO75351 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS4BO75351 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS4BO75351 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS4BO75351 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS4BO75351 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
VPS4BO75351 MTND4P31-201ENST00000425607 1343 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS4BO75351 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS4BO75351 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS4BO75351 AC097461.1-201ENST00000568928 2821 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 MAPK10-338ENST00000641647 3362 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
VPS4BO75351 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
VPS4BO75351 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
VPS4BO75351 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
VPS4BO75351 FAM3C2-201ENST00000312214 681 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 RNU4-24P-201ENST00000364565 139 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 RNA5SP131-201ENST00000365452 119 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS4BO75351 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS4BO75351 SNORD116-4-201ENST00000384733 96 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 GSTA8P-201ENST00000404253 637 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 GAPDHP42-201ENST00000406848 981 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS4BO75351 RPL7P44-201ENST00000424827 742 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 AC234781.2-201ENST00000426370 994 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 RPP40P1-201ENST00000426762 456 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS4BO75351 RPL7L1P9-201ENST00000431298 745 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 USP9YP31-201ENST00000431405 881 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 AC096638.2-201ENST00000434965 711 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS4BO75351 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS4BO75351 RPL23AP76-201ENST00000441860 458 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS4BO75351 MTCO2P7-201ENST00000446518 666 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 RHEBP2-201ENST00000450289 600 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 AL109741.2-201ENST00000455561 343 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 RNU7-27P-201ENST00000459281 62 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 MTND4LP3-201ENST00000468320 276 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 CCDC75P1-201ENST00000469247 791 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS4BO75351 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC5.26□□□□□ -1.57
VPS4BO75351 AC117532.1-201ENST00000514638 323 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS4BO75351 RNU6-232P-201ENST00000517144 64 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.26□□□□□ -1.57
VPS4BO75351 AC105185.1-201ENST00000518705 535 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 AP000859.1-201ENST00000525536 307 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 AP003033.1-201ENST00000527244 415 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 OR4C2P-201ENST00000530855 1064 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 AC027369.5-201ENST00000533838 755 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS4BO75351 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS4BO75351 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS4BO75351 DPPA2P4-201ENST00000563717 878 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS4BO75351 AC009852.2-201ENST00000567898 485 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 RN7SL708P-201ENST00000580952 299 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 PRPF19P1-201ENST00000584766 898 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS4BO75351 AL031281.1-201ENST00000604049 488 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 AC090525.3-201ENST00000605601 189 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.26□□□□□ -1.57
VPS4BO75351 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS4BO75351 AL122125.1-201ENST00000616999 600 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 AC135068.5-201ENST00000624197 983 ntBASIC5.26□□□□□ -1.57
VPS4BO75351 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.26□□□□□ -1.57
VPS4BO75351 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS4BO75351 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS4BO75351 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS4BO75351 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS4BO75351 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.26□□□□□ -1.57
VPS4BO75351 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS4BO75351 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
VPS4BO75351 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS4BO75351 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS4BO75351 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS4BO75351 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS4BO75351 SGO1P1-201ENST00000603525 1447 ntBASIC5.25□□□□□ -1.57
VPS4BO75351 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms