Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 RN7SL413P-201ENST00000482700 297 ntBASIC7.36□□□□□ -1.23
HOXA2O43364 UBA52P3-201ENST00000491303 382 ntBASIC7.36□□□□□ -1.23
HOXA2O43364 AC011005.3-201ENST00000491624 395 ntBASIC7.36□□□□□ -1.23
HOXA2O43364 AC091849.1-201ENST00000509920 121 ntBASIC7.36□□□□□ -1.23
HOXA2O43364 CDV3-208ENST00000511392 554 ntTSL 5 BASIC7.36□□□□□ -1.23
HOXA2O43364 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC7.36□□□□□ -1.23
HOXA2O43364 RNU6-488P-201ENST00000515918 99 ntBASIC7.36□□□□□ -1.23
HOXA2O43364 RNU4ATAC8P-201ENST00000516196 109 ntBASIC7.36□□□□□ -1.23
HOXA2O43364 RNU6-1137P-201ENST00000517073 99 ntBASIC7.36□□□□□ -1.23
HOXA2O43364 MEG8-218ENST00000556720 456 ntTSL 3 BASIC7.36□□□□□ -1.23
HOXA2O43364 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.36□□□□□ -1.23
HOXA2O43364 AC008269.2-201ENST00000561915 1105 ntBASIC7.36□□□□□ -1.23
HOXA2O43364 AL356432.3-201ENST00000568952 465 ntBASIC7.36□□□□□ -1.23
HOXA2O43364 AL669831.4-202ENST00000590817 238 ntBASIC7.36□□□□□ -1.23
HOXA2O43364 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.36□□□□□ -1.23
HOXA2O43364 AC007938.3-201ENST00000604965 623 ntBASIC7.36□□□□□ -1.23
HOXA2O43364 AC245389.1-201ENST00000605141 529 ntBASIC7.36□□□□□ -1.23
HOXA2O43364 AC090510.2-201ENST00000617465 629 ntBASIC7.36□□□□□ -1.23
HOXA2O43364 MIR6806-201ENST00000622141 64 ntBASIC7.36□□□□□ -1.23
HOXA2O43364 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC7.36□□□□□ -1.23
HOXA2O43364 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.36□□□□□ -1.23
HOXA2O43364 BMPR1APS1-201ENST00000403332 1598 ntBASIC7.36□□□□□ -1.23
HOXA2O43364 CDC27P2-201ENST00000425026 1922 ntBASIC7.36□□□□□ -1.23
HOXA2O43364 AL096816.1-201ENST00000623300 2920 ntBASIC7.36□□□□□ -1.23
HOXA2O43364 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.36□□□□□ -1.23
HOXA2O43364 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
HOXA2O43364 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
HOXA2O43364 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC7.36□□□□□ -1.23
HOXA2O43364 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
HOXA2O43364 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
HOXA2O43364 AC107021.2-201ENST00000567714 2095 ntBASIC7.36□□□□□ -1.23
HOXA2O43364 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
HOXA2O43364 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HOXA2O43364 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.35□□□□□ -1.23
HOXA2O43364 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
HOXA2O43364 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC7.35□□□□□ -1.23
HOXA2O43364 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HOXA2O43364 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HOXA2O43364 SELE-204ENST00000367776 3576 ntTSL 5 BASIC7.35□□□□□ -1.23
HOXA2O43364 SELE-205ENST00000367777 3576 ntTSL 5 BASIC7.35□□□□□ -1.23
HOXA2O43364 Y_RNA.301-201ENST00000364990 103 ntBASIC7.35□□□□□ -1.23
HOXA2O43364 U3.23-201ENST00000391132 200 ntBASIC7.35□□□□□ -1.23
HOXA2O43364 AL590635.1-201ENST00000406314 586 ntBASIC7.35□□□□□ -1.23
HOXA2O43364 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
HOXA2O43364 CYCSP17-201ENST00000407870 315 ntBASIC7.35□□□□□ -1.23
HOXA2O43364 RNU6-370P-201ENST00000411008 104 ntBASIC7.35□□□□□ -1.23
HOXA2O43364 PRELID3BP11-201ENST00000414230 479 ntBASIC7.35□□□□□ -1.23
HOXA2O43364 METTL15P3-201ENST00000415522 1221 ntBASIC7.35□□□□□ -1.23
HOXA2O43364 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC7.35□□□□□ -1.23
HOXA2O43364 AC114482.1-201ENST00000418010 247 ntBASIC7.35□□□□□ -1.23
HOXA2O43364 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC7.35□□□□□ -1.23
HOXA2O43364 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
HOXA2O43364 AC010881.1-201ENST00000433830 235 ntBASIC7.35□□□□□ -1.23
HOXA2O43364 AL138899.2-201ENST00000439139 499 ntBASIC7.35□□□□□ -1.23
HOXA2O43364 PFN1P11-201ENST00000445829 389 ntBASIC7.35□□□□□ -1.23
HOXA2O43364 RPL23AP28-201ENST00000448062 470 ntBASIC7.35□□□□□ -1.23
HOXA2O43364 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC7.35□□□□□ -1.23
HOXA2O43364 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC7.35□□□□□ -1.23
HOXA2O43364 RPL21P99-201ENST00000480369 423 ntBASIC7.35□□□□□ -1.23
HOXA2O43364 RN7SL187P-201ENST00000495587 303 ntBASIC7.35□□□□□ -1.23
HOXA2O43364 AC025164.1-201ENST00000496249 478 ntBASIC7.35□□□□□ -1.23
HOXA2O43364 AL390198.2-201ENST00000510553 222 ntBASIC7.35□□□□□ -1.23
HOXA2O43364 APOBEC3AP1-201ENST00000511396 287 ntBASIC7.35□□□□□ -1.23
HOXA2O43364 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7.35□□□□□ -1.23
HOXA2O43364 SCARNA24.1-201ENST00000516465 137 ntBASIC7.35□□□□□ -1.23
HOXA2O43364 RNU6-1271P-201ENST00000517049 105 ntBASIC7.35□□□□□ -1.23
HOXA2O43364 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC7.35□□□□□ -1.23
HOXA2O43364 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HOXA2O43364 AC140063.1-201ENST00000541343 259 ntBASIC7.35□□□□□ -1.23
HOXA2O43364 MIR4433B-201ENST00000581329 102 ntBASIC7.35□□□□□ -1.23
HOXA2O43364 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC7.35□□□□□ -1.23
HOXA2O43364 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.35□□□□□ -1.23
HOXA2O43364 AC061999.1-201ENST00000624454 177 ntBASIC7.35□□□□□ -1.23
HOXA2O43364 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HOXA2O43364 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HOXA2O43364 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
HOXA2O43364 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
HOXA2O43364 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HOXA2O43364 NF1P8-201ENST00000415351 1461 ntBASIC7.35□□□□□ -1.23
HOXA2O43364 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC7.35□□□□□ -1.23
HOXA2O43364 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HOXA2O43364 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC7.35□□□□□ -1.23
HOXA2O43364 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HOXA2O43364 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.34□□□□□ -1.23
HOXA2O43364 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HOXA2O43364 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.34□□□□□ -1.23
HOXA2O43364 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC7.34□□□□□ -1.23
HOXA2O43364 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
HOXA2O43364 SMG1P5-202ENST00000529428 4219 ntBASIC7.34□□□□□ -1.23
HOXA2O43364 SMG1P2-201ENST00000566127 4221 ntBASIC7.34□□□□□ -1.23
HOXA2O43364 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.34□□□□□ -1.23
HOXA2O43364 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
HOXA2O43364 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
HOXA2O43364 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
HOXA2O43364 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
HOXA2O43364 Y_RNA.112-201ENST00000363250 102 ntBASIC7.34□□□□□ -1.23
HOXA2O43364 RNU4-48P-201ENST00000365559 182 ntBASIC7.34□□□□□ -1.23
HOXA2O43364 Y_RNA.373-201ENST00000365600 103 ntBASIC7.34□□□□□ -1.23
HOXA2O43364 RNU4-20P-201ENST00000365601 151 ntBASIC7.34□□□□□ -1.23
HOXA2O43364 MDM4-202ENST00000367180 547 ntTSL 3 BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms