Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 IPO8P1-201ENST00000455509 3109 ntBASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 SNORA31-201ENST00000362607 130 ntBASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 RNU6-225P-201ENST00000384613 103 ntBASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 ATP5F1P4-201ENST00000397288 746 ntBASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 AL590139.1-201ENST00000416267 400 ntBASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 VN1R31P-201ENST00000417498 730 ntBASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 MTND2P16-201ENST00000419987 799 ntBASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 GLUD1P9-201ENST00000420997 1173 ntBASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 RPS27AP12-201ENST00000429552 465 ntBASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 RPL23AP69-201ENST00000431134 458 ntBASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 MTCO1P43-201ENST00000431831 488 ntBASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 FTH1P1-201ENST00000437933 532 ntBASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 SNORA71B-202ENST00000439232 272 ntBASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 AL158214.1-201ENST00000444423 404 ntBASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 AL139135.2-201ENST00000445040 433 ntBASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 AL500522.2-201ENST00000448562 343 ntBASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 SLC31A1P1-201ENST00000451221 567 ntBASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 AC104308.1-201ENST00000454621 333 ntBASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 RPS27AP17-201ENST00000463344 455 ntBASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 CYCSP20-201ENST00000473154 315 ntBASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 AC015864.1-201ENST00000496512 544 ntBASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 AC005921.1-201ENST00000510589 286 ntBASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 MIR5699-201ENST00000578903 90 ntBASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 KPNA2P3-201ENST00000584190 848 ntBASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 BNIP3P32-201ENST00000600015 554 ntBASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 MIR6721-201ENST00000617181 87 ntBASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 HOTTIP_3.1-201ENST00000619957 337 ntBASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 AC104966.1-201ENST00000467010 1464 ntBASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CHKB-CPT1BH3BT56 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 AL442639.1-201ENST00000625030 1899 ntBASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 RNA5SP105-201ENST00000391123 113 ntBASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 MIR1179-201ENST00000408703 91 ntBASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 SNORA57.3-201ENST00000411095 141 ntBASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 RPL17P36-201ENST00000420302 549 ntBASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 RPL12P43-201ENST00000420608 499 ntBASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 AC002075.2-201ENST00000425207 252 ntBASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 AL353705.1-201ENST00000433468 480 ntBASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 LYPLA1P1-201ENST00000434514 622 ntBASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 SKP1P1-201ENST00000438081 489 ntBASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 RPS7P5-201ENST00000441482 581 ntBASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 ARL2BPP10-201ENST00000446487 531 ntBASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms