Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.19□□□□□ -1.9
COLCA2A8K830 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC3.19□□□□□ -1.9
COLCA2A8K830 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.19□□□□□ -1.9
COLCA2A8K830 AC234781.3-201ENST00000452540 973 ntBASIC3.19□□□□□ -1.9
COLCA2A8K830 RPL6P9-201ENST00000466502 859 ntBASIC3.19□□□□□ -1.9
COLCA2A8K830 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
COLCA2A8K830 PHBP14-201ENST00000512887 367 ntBASIC3.19□□□□□ -1.9
COLCA2A8K830 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.19□□□□□ -1.9
COLCA2A8K830 AC138517.1-201ENST00000515724 568 ntBASIC3.19□□□□□ -1.9
COLCA2A8K830 AC093331.1-201ENST00000521474 169 ntBASIC3.19□□□□□ -1.9
COLCA2A8K830 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC3.19□□□□□ -1.9
COLCA2A8K830 AL109766.1-201ENST00000555080 552 ntBASIC3.19□□□□□ -1.9
COLCA2A8K830 HMGN1P26-201ENST00000558737 303 ntBASIC3.19□□□□□ -1.9
COLCA2A8K830 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.19□□□□□ -1.9
COLCA2A8K830 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.19□□□□□ -1.9
COLCA2A8K830 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC3.19□□□□□ -1.9
COLCA2A8K830 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC3.19□□□□□ -1.9
COLCA2A8K830 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.19□□□□□ -1.9
COLCA2A8K830 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.19□□□□□ -1.9
COLCA2A8K830 AC040174.2-201ENST00000602701 465 ntBASIC3.19□□□□□ -1.9
COLCA2A8K830 AL023583.1-201ENST00000607518 1143 ntBASIC3.19□□□□□ -1.9
COLCA2A8K830 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.19□□□□□ -1.9
COLCA2A8K830 FAM27B-201ENST00000610601 213 ntBASIC3.19□□□□□ -1.9
COLCA2A8K830 MIR6885-201ENST00000612241 66 ntBASIC3.19□□□□□ -1.9
COLCA2A8K830 MIR6883-201ENST00000614952 78 ntBASIC3.19□□□□□ -1.9
COLCA2A8K830 MIR6721-201ENST00000617181 87 ntBASIC3.19□□□□□ -1.9
COLCA2A8K830 MIR6891-201ENST00000618788 93 ntBASIC3.19□□□□□ -1.9
COLCA2A8K830 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.19□□□□□ -1.9
COLCA2A8K830 FP325313.1-201ENST00000638228 703 ntBASIC3.19□□□□□ -1.9
COLCA2A8K830 AC104966.1-201ENST00000467010 1464 ntBASIC3.19□□□□□ -1.9
COLCA2A8K830 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
COLCA2A8K830 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
COLCA2A8K830 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
COLCA2A8K830 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
COLCA2A8K830 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
COLCA2A8K830 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.18□□□□□ -1.9
COLCA2A8K830 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
COLCA2A8K830 USP8P1-201ENST00000494673 3183 ntBASIC3.18□□□□□ -1.9
COLCA2A8K830 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
COLCA2A8K830 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
COLCA2A8K830 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
COLCA2A8K830 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
COLCA2A8K830 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
COLCA2A8K830 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
COLCA2A8K830 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
COLCA2A8K830 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
COLCA2A8K830 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
COLCA2A8K830 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
COLCA2A8K830 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
COLCA2A8K830 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
COLCA2A8K830 BPHL-201ENST00000380368 797 ntTSL 5 BASIC3.18□□□□□ -1.9
COLCA2A8K830 RNU6-40P-201ENST00000384254 107 ntBASIC3.18□□□□□ -1.9
COLCA2A8K830 RNA5SP122-201ENST00000384457 108 ntBASIC3.18□□□□□ -1.9
COLCA2A8K830 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.18□□□□□ -1.9
COLCA2A8K830 AC069218.2-201ENST00000411665 344 ntBASIC3.18□□□□□ -1.9
COLCA2A8K830 RPL34P3-201ENST00000421454 338 ntBASIC3.18□□□□□ -1.9
COLCA2A8K830 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.18□□□□□ -1.9
COLCA2A8K830 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
COLCA2A8K830 CYCSP6-201ENST00000434498 302 ntBASIC3.18□□□□□ -1.9
COLCA2A8K830 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
COLCA2A8K830 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC3.18□□□□□ -1.9
COLCA2A8K830 MTND4P15-201ENST00000437913 1033 ntBASIC3.18□□□□□ -1.9
COLCA2A8K830 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.18□□□□□ -1.9
COLCA2A8K830 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.18□□□□□ -1.9
COLCA2A8K830 AC245047.2-201ENST00000441060 530 ntBASIC3.18□□□□□ -1.9
COLCA2A8K830 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC3.18□□□□□ -1.9
COLCA2A8K830 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.18□□□□□ -1.9
COLCA2A8K830 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC3.18□□□□□ -1.9
COLCA2A8K830 RPL23AP43-201ENST00000446445 471 ntBASIC3.18□□□□□ -1.9
COLCA2A8K830 AC092647.2-201ENST00000452998 253 ntBASIC3.18□□□□□ -1.9
COLCA2A8K830 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.18□□□□□ -1.9
COLCA2A8K830 AP002345.1-201ENST00000456493 928 ntBASIC3.18□□□□□ -1.9
COLCA2A8K830 AC104629.2-201ENST00000468627 598 ntBASIC3.18□□□□□ -1.9
COLCA2A8K830 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
COLCA2A8K830 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.18□□□□□ -1.9
COLCA2A8K830 AC091874.2-201ENST00000505889 720 ntBASIC3.18□□□□□ -1.9
COLCA2A8K830 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.18□□□□□ -1.9
COLCA2A8K830 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC3.18□□□□□ -1.9
COLCA2A8K830 CYCSP22-201ENST00000517555 339 ntBASIC3.18□□□□□ -1.9
COLCA2A8K830 AC113191.1-201ENST00000517759 403 ntBASIC3.18□□□□□ -1.9
COLCA2A8K830 NDUFB9P3-201ENST00000521269 501 ntBASIC3.18□□□□□ -1.9
COLCA2A8K830 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC3.18□□□□□ -1.9
COLCA2A8K830 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC3.18□□□□□ -1.9
COLCA2A8K830 OR8K2P-201ENST00000524645 927 ntBASIC3.18□□□□□ -1.9
COLCA2A8K830 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
COLCA2A8K830 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.18□□□□□ -1.9
COLCA2A8K830 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.18□□□□□ -1.9
COLCA2A8K830 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.18□□□□□ -1.9
COLCA2A8K830 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC3.18□□□□□ -1.9
COLCA2A8K830 RN7SL652P-201ENST00000577769 300 ntBASIC3.18□□□□□ -1.9
COLCA2A8K830 RN7SL230P-201ENST00000580835 303 ntBASIC3.18□□□□□ -1.9
COLCA2A8K830 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.18□□□□□ -1.9
COLCA2A8K830 AL133247.2-201ENST00000603236 482 ntBASIC3.18□□□□□ -1.9
COLCA2A8K830 AP004372.1-201ENST00000604842 844 ntBASIC3.18□□□□□ -1.9
COLCA2A8K830 AC018816.2-201ENST00000621460 353 ntBASIC3.18□□□□□ -1.9
COLCA2A8K830 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
COLCA2A8K830 CEP170P1-201ENST00000502249 4587 ntBASIC3.18□□□□□ -1.9
COLCA2A8K830 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
COLCA2A8K830 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
COLCA2A8K830 DDX6P1-205ENST00000441966 1436 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms