Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 SNORA56-201ENST00000383966 129 ntBASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 RNA5SP87-201ENST00000384155 118 ntBASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 SNORA70.10-201ENST00000384515 134 ntBASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 AL590290.1-201ENST00000405336 380 ntBASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 RNU6-575P-201ENST00000411326 105 ntBASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 RPL26P29-201ENST00000415623 438 ntBASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 PRDX3P4-201ENST00000470828 747 ntBASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 RPL21P6-201ENST00000479171 504 ntBASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 GAPDHP56-201ENST00000506031 988 ntBASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 MRPS33P2-201ENST00000507850 322 ntBASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 OR4A2P-201ENST00000527276 913 ntBASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 UBTFL10-201ENST00000528532 562 ntBASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 MTND4LP24-201ENST00000572277 291 ntBASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 RN7SL290P-201ENST00000578661 300 ntBASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 MIR4270-201ENST00000581799 70 ntBASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 MIR4737-201ENST00000583979 81 ntBASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 AP001542.2-201ENST00000593141 364 ntBASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 AP000238.1-201ENST00000608759 426 ntBASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 AL161616.1-201ENST00000611867 286 ntBASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 AC231759.1-201ENST00000616455 597 ntBASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 AC092608.3-201ENST00000625017 386 ntBASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 ATE1-AS1-202ENST00000636460 506 ntBASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 AC099654.2-201ENST00000433031 1980 ntBASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 SDAD1P1-202ENST00000524156 2051 ntBASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.01□□□□□ -1.61
TBC1D3FA6NER0 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TBC1D3FA6NER0 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5□□□□□ -1.61
TBC1D3FA6NER0 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TBC1D3FA6NER0 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5□□□□□ -1.61
TBC1D3FA6NER0 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5□□□□□ -1.61
TBC1D3FA6NER0 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5□□□□□ -1.61
TBC1D3FA6NER0 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5□□□□□ -1.61
TBC1D3FA6NER0 AC097461.1-201ENST00000568928 2821 ntBASIC5□□□□□ -1.61
TBC1D3FA6NER0 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5□□□□□ -1.61
TBC1D3FA6NER0 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
TBC1D3FA6NER0 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5□□□□□ -1.61
TBC1D3FA6NER0 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5□□□□□ -1.61
TBC1D3FA6NER0 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5□□□□□ -1.61
TBC1D3FA6NER0 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
TBC1D3FA6NER0 SNORA40.2-201ENST00000390847 128 ntBASIC5□□□□□ -1.61
TBC1D3FA6NER0 AL035079.1-201ENST00000405210 287 ntBASIC5□□□□□ -1.61
TBC1D3FA6NER0 SNORA77-201ENST00000408716 125 ntBASIC5□□□□□ -1.61
TBC1D3FA6NER0 HMGB1P49-201ENST00000418882 569 ntBASIC5□□□□□ -1.61
TBC1D3FA6NER0 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5□□□□□ -1.61
TBC1D3FA6NER0 GAPDHP49-201ENST00000421421 961 ntBASIC5□□□□□ -1.61
TBC1D3FA6NER0 AC010099.3-201ENST00000423896 409 ntBASIC5□□□□□ -1.61
TBC1D3FA6NER0 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5□□□□□ -1.61
TBC1D3FA6NER0 ZDHHC20P2-201ENST00000424108 429 ntBASIC5□□□□□ -1.61
TBC1D3FA6NER0 RPF2P1-201ENST00000424137 906 ntBASIC5□□□□□ -1.61
TBC1D3FA6NER0 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms