Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 MIR6837-201ENST00000620884 64 ntBASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 AC091931.1-201ENST00000623488 728 ntBASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 AC087359.1-201ENST00000508335 1740 ntBASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 AC120338.1-201ENST00000625074 1541 ntBASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 AC114786.1-201ENST00000512892 1415 ntBASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PCDHGA3Q9Y5H0 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 AP000526.1-201ENST00000603308 1388 ntBASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 AL391994.1-201ENST00000254724 282 ntBASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 AL159987.1-201ENST00000347911 293 ntBASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 RNU1-19P-201ENST00000363306 165 ntBASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 RNU6-1200P-201ENST00000384162 107 ntBASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 RNU6-253P-201ENST00000384730 105 ntBASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 NCSTNP1-201ENST00000406229 144 ntBASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 AC099336.2-201ENST00000422457 254 ntBASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 AL390119.1-201ENST00000440329 312 ntBASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 GTF3AP5-201ENST00000442645 697 ntBASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 AC099560.2-201ENST00000457554 255 ntBASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 AL603882.1-201ENST00000463059 681 ntBASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 RN7SL515P-201ENST00000463999 297 ntBASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 AC006499.3-201ENST00000506077 748 ntBASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 GAPDHP62-201ENST00000515313 990 ntBASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 SOD1P3-201ENST00000518682 454 ntBASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 OR5AK1P-201ENST00000524837 922 ntBASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 FKBP1AP1-201ENST00000594588 318 ntBASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 AL355974.3-201ENST00000617383 467 ntBASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 MIR8080-201ENST00000622224 89 ntBASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 SAMMSON-227ENST00000642114 1199 ntBASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 AC083843.2-201ENST00000568248 6253 ntBASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 XPOTP1-201ENST00000443317 2398 ntBASIC5.47□□□□□ -1.53
PCDHGA3Q9Y5H0 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
PCDHGA3Q9Y5H0 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.53
PCDHGA3Q9Y5H0 Z98755.1-201ENST00000407015 1384 ntBASIC5.46□□□□□ -1.54
PCDHGA3Q9Y5H0 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
PCDHGA3Q9Y5H0 MFSD8-239ENST00000641590 2479 ntBASIC5.46□□□□□ -1.54
PCDHGA3Q9Y5H0 Y_RNA.25-201ENST00000362528 102 ntBASIC5.46□□□□□ -1.54
PCDHGA3Q9Y5H0 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCDHGA3Q9Y5H0 MIR506-201ENST00000384998 124 ntBASIC5.46□□□□□ -1.54
PCDHGA3Q9Y5H0 AC009804.1-201ENST00000400949 179 ntBASIC5.46□□□□□ -1.54
PCDHGA3Q9Y5H0 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.46□□□□□ -1.54
PCDHGA3Q9Y5H0 P2RY10P2-201ENST00000416730 913 ntBASIC5.46□□□□□ -1.54
PCDHGA3Q9Y5H0 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms