Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 HSPA8P17-201ENST00000427029 1382 ntBASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 AC097063.1-201ENST00000426714 1797 ntBASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 AL138820.1-201ENST00000617901 5305 ntBASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 AC100757.1-201ENST00000616872 1835 ntBASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 MIR765-201ENST00000390226 114 ntBASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 AL645733.1-201ENST00000402250 217 ntBASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 AC019050.1-201ENST00000418508 492 ntBASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 GSTA7P-201ENST00000438425 448 ntBASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 AC093155.1-201ENST00000440164 826 ntBASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 MTND2P4-201ENST00000445034 1004 ntBASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 AL606662.1-201ENST00000445763 553 ntBASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 AC104306.1-201ENST00000449702 371 ntBASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 TPMTP4-201ENST00000450749 678 ntBASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 RPS18P6-201ENST00000476880 458 ntBASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 RPL7P6-201ENST00000480903 738 ntBASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 AC021146.8-201ENST00000507455 733 ntBASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 MTND6P2-201ENST00000512226 524 ntBASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 RNA5SP135-201ENST00000517019 125 ntBASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 OR5AZ1P-201ENST00000527448 943 ntBASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 AC116553.2-201ENST00000564203 463 ntBASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 AC006539.2-201ENST00000601729 572 ntBASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 AC010632.3-201ENST00000611377 369 ntBASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 AL118522.2-201ENST00000616045 615 ntBASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 AP002505.2-201ENST00000623585 696 ntBASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PCDHB1Q9Y5F3 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 OR56B2P-201ENST00000317102 954 ntBASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 RNU6-839P-201ENST00000363347 108 ntBASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 MOB4-205ENST00000409916 829 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 AL390774.1-201ENST00000411924 246 ntBASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 AL450992.3-201ENST00000413192 568 ntBASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 AL354766.1-201ENST00000423396 542 ntBASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 Z93242.1-201ENST00000427102 353 ntBASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 H2AFZP6-201ENST00000444403 394 ntBASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 RPS27AP15-201ENST00000447672 466 ntBASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 AL672138.1-201ENST00000450604 1015 ntBASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms