Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RLIMP2-201ENST00000427891 1563 ntBASIC7.63□□□□□ -1.19
ZC3H4Q9UPT8 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
ZC3H4Q9UPT8 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 LINC01963-201ENST00000562038 3148 ntBASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 RNU1-24P-201ENST00000364285 165 ntBASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 RPL7P56-201ENST00000429441 717 ntBASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 SPRYD7P1-201ENST00000443861 570 ntBASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 C1DP4-201ENST00000455429 424 ntBASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 HNRNPDLP3-201ENST00000456745 380 ntBASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 RPL23AP64-201ENST00000469465 435 ntBASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 AC007537.2-201ENST00000472093 511 ntBASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 AC017015.1-201ENST00000477387 286 ntBASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 AC108693.1-201ENST00000496068 432 ntBASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 AC023818.1-201ENST00000498379 384 ntBASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 AC098799.3-201ENST00000506095 438 ntBASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 CDH12P4-201ENST00000517835 295 ntBASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 CDH12P3-201ENST00000517935 295 ntBASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 CDH12P1-201ENST00000518435 295 ntBASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 AC022690.1-201ENST00000526681 550 ntBASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 DEFB131D-201ENST00000526803 184 ntBASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 EIF4A2P5-201ENST00000529914 499 ntBASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 AP003122.4-201ENST00000530980 758 ntBASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 AC011840.5-201ENST00000582125 771 ntBASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 MIR6748-201ENST00000610433 71 ntBASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 AC005618.4-201ENST00000625053 554 ntBASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 PISRT1-201ENST00000626175 531 ntBASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 UGT2B27P-201ENST00000505092 1620 ntBASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 AL442128.2-201ENST00000620246 1824 ntBASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
ZC3H4Q9UPT8 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 RNA5SP514-201ENST00000363717 111 ntBASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 AL133270.1-201ENST00000402635 279 ntBASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 MAST4-207ENST00000407621 559 ntTSL 2 BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 RPS7P8-201ENST00000418311 581 ntBASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 RPS7P14-201ENST00000426405 583 ntBASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 AC127526.2-201ENST00000426436 775 ntBASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 AC002504.1-201ENST00000438281 691 ntBASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 RPL26P28-201ENST00000451325 435 ntBASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 AC010486.1-201ENST00000511793 424 ntBASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 AL845331.3-202ENST00000562856 261 ntBASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 AC037471.2-201ENST00000564941 598 ntBASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 SS18L2P2-201ENST00000583960 235 ntBASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 AC022916.3-201ENST00000592961 742 ntBASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 AL162413.1-201ENST00000603198 110 ntBASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 AL451049.1-201ENST00000608672 497 ntBASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 AC093388.1-201ENST00000609166 430 ntBASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 AC006504.8-201ENST00000621046 635 ntBASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 AC009268.2-201ENST00000621925 457 ntBASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 AC091905.1-201ENST00000624400 311 ntBASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 MIR193BHG-214ENST00000641765 509 ntBASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 AC109780.1-201ENST00000451768 1344 ntBASIC7.61□□□□□ -1.19
ZC3H4Q9UPT8 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms