Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.16□□□□□ -1.58
SCN11AQ9UI33 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.16□□□□□ -1.58
SCN11AQ9UI33 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SCN11AQ9UI33 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SCN11AQ9UI33 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.16□□□□□ -1.58
SCN11AQ9UI33 MARK2P15-201ENST00000432204 2186 ntBASIC5.16□□□□□ -1.58
SCN11AQ9UI33 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.16□□□□□ -1.58
SCN11AQ9UI33 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
SCN11AQ9UI33 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SCN11AQ9UI33 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SCN11AQ9UI33 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SCN11AQ9UI33 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SCN11AQ9UI33 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SCN11AQ9UI33 GAPDHP36-201ENST00000480688 918 ntBASIC5.16□□□□□ -1.58
SCN11AQ9UI33 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.16□□□□□ -1.58
SCN11AQ9UI33 RNU6-513P-201ENST00000516104 104 ntBASIC5.16□□□□□ -1.58
SCN11AQ9UI33 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.16□□□□□ -1.58
SCN11AQ9UI33 NPM1P47-201ENST00000560843 856 ntBASIC5.16□□□□□ -1.58
SCN11AQ9UI33 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.16□□□□□ -1.58
SCN11AQ9UI33 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SCN11AQ9UI33 MIR3200-201ENST00000580767 85 ntBASIC5.16□□□□□ -1.58
SCN11AQ9UI33 AC011471.1-201ENST00000585766 187 ntBASIC5.16□□□□□ -1.58
SCN11AQ9UI33 AL606490.9-201ENST00000603331 271 ntBASIC5.16□□□□□ -1.58
SCN11AQ9UI33 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.16□□□□□ -1.58
SCN11AQ9UI33 AC005858.4-201ENST00000623191 700 ntBASIC5.16□□□□□ -1.58
SCN11AQ9UI33 AC073530.2-201ENST00000623987 261 ntBASIC5.16□□□□□ -1.58
SCN11AQ9UI33 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SCN11AQ9UI33 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
SCN11AQ9UI33 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
SCN11AQ9UI33 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SCN11AQ9UI33 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.15□□□□□ -1.58
SCN11AQ9UI33 AL590704.1-201ENST00000402856 794 ntBASIC5.15□□□□□ -1.58
SCN11AQ9UI33 RAB9AP3-201ENST00000412737 573 ntBASIC5.15□□□□□ -1.58
SCN11AQ9UI33 PGBD4P8-201ENST00000412993 562 ntBASIC5.15□□□□□ -1.58
SCN11AQ9UI33 TCEA1P4-201ENST00000415066 844 ntBASIC5.15□□□□□ -1.58
SCN11AQ9UI33 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.15□□□□□ -1.58
SCN11AQ9UI33 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.15□□□□□ -1.58
SCN11AQ9UI33 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.15□□□□□ -1.58
SCN11AQ9UI33 HMGN2P31-201ENST00000432430 273 ntBASIC5.15□□□□□ -1.58
SCN11AQ9UI33 RPL23AP89-201ENST00000439324 255 ntBASIC5.15□□□□□ -1.58
SCN11AQ9UI33 GEMIN8P3-201ENST00000445417 720 ntBASIC5.15□□□□□ -1.58
SCN11AQ9UI33 RAB9AP1-201ENST00000449393 573 ntBASIC5.15□□□□□ -1.58
SCN11AQ9UI33 AC008694.2-201ENST00000517591 306 ntBASIC5.15□□□□□ -1.58
SCN11AQ9UI33 IGLV3-26-201ENST00000520756 302 ntBASIC5.15□□□□□ -1.58
SCN11AQ9UI33 AC093014.1-201ENST00000548926 724 ntBASIC5.15□□□□□ -1.58
SCN11AQ9UI33 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.15□□□□□ -1.58
SCN11AQ9UI33 RPL23AP87-202ENST00000573039 466 ntBASIC5.15□□□□□ -1.58
SCN11AQ9UI33 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC5.15□□□□□ -1.58
SCN11AQ9UI33 AL451044.1-201ENST00000604867 238 ntBASIC5.15□□□□□ -1.58
SCN11AQ9UI33 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.15□□□□□ -1.58
SCN11AQ9UI33 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.15□□□□□ -1.58
SCN11AQ9UI33 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.59
SCN11AQ9UI33 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SCN11AQ9UI33 RNU1-15P-201ENST00000353977 144 ntBASIC5.14□□□□□ -1.59
SCN11AQ9UI33 NDUFB4P4-201ENST00000404822 243 ntBASIC5.14□□□□□ -1.59
SCN11AQ9UI33 KRR1P1-201ENST00000419430 803 ntBASIC5.14□□□□□ -1.59
SCN11AQ9UI33 AC117434.1-201ENST00000419971 836 ntBASIC5.14□□□□□ -1.59
SCN11AQ9UI33 DYNLL1P7-201ENST00000429273 258 ntBASIC5.14□□□□□ -1.59
SCN11AQ9UI33 FTH1P25-201ENST00000447665 469 ntBASIC5.14□□□□□ -1.59
SCN11AQ9UI33 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.14□□□□□ -1.59
SCN11AQ9UI33 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.14□□□□□ -1.59
SCN11AQ9UI33 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.14□□□□□ -1.59
SCN11AQ9UI33 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SCN11AQ9UI33 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.14□□□□□ -1.59
SCN11AQ9UI33 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.14□□□□□ -1.59
SCN11AQ9UI33 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.14□□□□□ -1.59
SCN11AQ9UI33 AL583832.1-201ENST00000603227 784 ntBASIC5.14□□□□□ -1.59
SCN11AQ9UI33 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC5.14□□□□□ -1.59
SCN11AQ9UI33 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SCN11AQ9UI33 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SCN11AQ9UI33 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
SCN11AQ9UI33 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SCN11AQ9UI33 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SCN11AQ9UI33 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.14□□□□□ -1.59
SCN11AQ9UI33 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SCN11AQ9UI33 MIR491-201ENST00000384877 84 ntBASIC5.14□□□□□ -1.59
SCN11AQ9UI33 RNU6-316P-201ENST00000391027 107 ntBASIC5.14□□□□□ -1.59
SCN11AQ9UI33 SNORA57.3-201ENST00000411095 141 ntBASIC5.14□□□□□ -1.59
SCN11AQ9UI33 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.14□□□□□ -1.59
SCN11AQ9UI33 PSMC1P13-201ENST00000458195 985 ntBASIC5.14□□□□□ -1.59
SCN11AQ9UI33 AC119751.5-201ENST00000514077 770 ntBASIC5.14□□□□□ -1.59
SCN11AQ9UI33 RN7SKP157-201ENST00000516174 282 ntBASIC5.14□□□□□ -1.59
SCN11AQ9UI33 AC107016.1-201ENST00000550463 337 ntBASIC5.14□□□□□ -1.59
SCN11AQ9UI33 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.14□□□□□ -1.59
SCN11AQ9UI33 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5.14□□□□□ -1.59
SCN11AQ9UI33 AC007599.1-201ENST00000568688 1174 ntBASIC5.14□□□□□ -1.59
SCN11AQ9UI33 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.14□□□□□ -1.59
SCN11AQ9UI33 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.14□□□□□ -1.59
SCN11AQ9UI33 SAMMSON-213ENST00000641336 1521 ntBASIC5.13□□□□□ -1.59
SCN11AQ9UI33 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
SCN11AQ9UI33 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC5.13□□□□□ -1.59
SCN11AQ9UI33 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SCN11AQ9UI33 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SCN11AQ9UI33 MIR30B-201ENST00000384850 88 ntBASIC5.13□□□□□ -1.59
SCN11AQ9UI33 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.13□□□□□ -1.59
SCN11AQ9UI33 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.13□□□□□ -1.59
SCN11AQ9UI33 AC006042.3-201ENST00000454684 1469 ntBASIC5.13□□□□□ -1.59
SCN11AQ9UI33 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC5.13□□□□□ -1.59
SCN11AQ9UI33 AC006499.5-201ENST00000505037 514 ntBASIC5.13□□□□□ -1.59
SCN11AQ9UI33 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms