Protein–RNA interactions for Protein: Q9UBR4

LHX3, LIM/homeobox protein Lhx3, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3Q9UBR4 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LHX3Q9UBR4 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.42□□□□□ -1.7
LHX3Q9UBR4 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.42□□□□□ -1.7
LHX3Q9UBR4 AC022884.3-201ENST00000579571 248 ntBASIC4.42□□□□□ -1.7
LHX3Q9UBR4 AC007342.8-201ENST00000623278 678 ntBASIC4.42□□□□□ -1.7
LHX3Q9UBR4 AC140479.6-201ENST00000633535 357 ntBASIC4.42□□□□□ -1.7
LHX3Q9UBR4 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.42□□□□□ -1.7
LHX3Q9UBR4 FP325313.1-201ENST00000638228 703 ntBASIC4.42□□□□□ -1.7
LHX3Q9UBR4 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.42□□□□□ -1.7
LHX3Q9UBR4 AC104260.2-201ENST00000623551 3497 ntBASIC4.42□□□□□ -1.7
LHX3Q9UBR4 NEAT1-202ENST00000501122 22743 ntBASIC4.42□□□□□ -1.7
LHX3Q9UBR4 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
LHX3Q9UBR4 AC006971.1-201ENST00000407916 4486 ntBASIC4.42□□□□□ -1.7
LHX3Q9UBR4 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.42□□□□□ -1.7
LHX3Q9UBR4 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.41□□□□□ -1.7
LHX3Q9UBR4 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.41□□□□□ -1.7
LHX3Q9UBR4 AC107027.3-201ENST00000565095 3473 ntBASIC4.41□□□□□ -1.7
LHX3Q9UBR4 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LHX3Q9UBR4 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
LHX3Q9UBR4 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LHX3Q9UBR4 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LHX3Q9UBR4 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
LHX3Q9UBR4 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LHX3Q9UBR4 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LHX3Q9UBR4 RPS27AP11-201ENST00000402798 447 ntBASIC4.41□□□□□ -1.7
LHX3Q9UBR4 NRBF2P2-201ENST00000413087 861 ntBASIC4.41□□□□□ -1.7
LHX3Q9UBR4 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.41□□□□□ -1.7
LHX3Q9UBR4 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.41□□□□□ -1.7
LHX3Q9UBR4 AL591623.2-201ENST00000449978 222 ntBASIC4.41□□□□□ -1.7
LHX3Q9UBR4 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.41□□□□□ -1.7
LHX3Q9UBR4 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.41□□□□□ -1.7
LHX3Q9UBR4 NDUFA5P9-201ENST00000472609 340 ntBASIC4.41□□□□□ -1.7
LHX3Q9UBR4 METTL15P1-201ENST00000481421 1045 ntBASIC4.41□□□□□ -1.7
LHX3Q9UBR4 DEFB109F-201ENST00000491870 277 ntBASIC4.41□□□□□ -1.7
LHX3Q9UBR4 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC4.41□□□□□ -1.7
LHX3Q9UBR4 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.41□□□□□ -1.7
LHX3Q9UBR4 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.41□□□□□ -1.7
LHX3Q9UBR4 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.41□□□□□ -1.7
LHX3Q9UBR4 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.41□□□□□ -1.7
LHX3Q9UBR4 NPM1P47-201ENST00000560843 856 ntBASIC4.41□□□□□ -1.7
LHX3Q9UBR4 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.41□□□□□ -1.7
LHX3Q9UBR4 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.41□□□□□ -1.7
LHX3Q9UBR4 AP005262.1-201ENST00000582646 997 ntBASIC4.41□□□□□ -1.7
LHX3Q9UBR4 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.41□□□□□ -1.7
LHX3Q9UBR4 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.41□□□□□ -1.7
LHX3Q9UBR4 MIR6810-201ENST00000622701 70 ntBASIC4.41□□□□□ -1.7
LHX3Q9UBR4 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.41□□□□□ -1.7
LHX3Q9UBR4 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.41□□□□□ -1.7
LHX3Q9UBR4 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LHX3Q9UBR4 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LHX3Q9UBR4 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
LHX3Q9UBR4 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LHX3Q9UBR4 AC010329.2-201ENST00000595195 2737 ntBASIC4.41□□□□□ -1.7
LHX3Q9UBR4 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LHX3Q9UBR4 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.41□□□□□ -1.7
LHX3Q9UBR4 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
LHX3Q9UBR4 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.41□□□□□ -1.7
LHX3Q9UBR4 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LHX3Q9UBR4 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.4□□□□□ -1.7
LHX3Q9UBR4 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.7
LHX3Q9UBR4 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
LHX3Q9UBR4 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.4□□□□□ -1.71
LHX3Q9UBR4 RPL32P3-201ENST00000359025 275 ntBASIC4.4□□□□□ -1.71
LHX3Q9UBR4 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
LHX3Q9UBR4 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LHX3Q9UBR4 RNU4-31P-201ENST00000384211 141 ntBASIC4.4□□□□□ -1.71
LHX3Q9UBR4 UBE2V1P15-201ENST00000407776 448 ntBASIC4.4□□□□□ -1.71
LHX3Q9UBR4 SETP15-201ENST00000412724 337 ntBASIC4.4□□□□□ -1.71
LHX3Q9UBR4 AC011933.1-201ENST00000413334 321 ntBASIC4.4□□□□□ -1.71
LHX3Q9UBR4 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.4□□□□□ -1.71
LHX3Q9UBR4 MFSD13B-201ENST00000420133 1290 ntBASIC4.4□□□□□ -1.71
LHX3Q9UBR4 C4BPAP2-201ENST00000428434 478 ntBASIC4.4□□□□□ -1.71
LHX3Q9UBR4 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.4□□□□□ -1.71
LHX3Q9UBR4 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.4□□□□□ -1.71
LHX3Q9UBR4 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.4□□□□□ -1.71
LHX3Q9UBR4 HMGB1P26-201ENST00000452520 628 ntBASIC4.4□□□□□ -1.71
LHX3Q9UBR4 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.4□□□□□ -1.71
LHX3Q9UBR4 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.4□□□□□ -1.71
LHX3Q9UBR4 AC116533.1-201ENST00000459748 321 ntBASIC4.4□□□□□ -1.71
LHX3Q9UBR4 RN7SL303P-201ENST00000469773 251 ntBASIC4.4□□□□□ -1.71
LHX3Q9UBR4 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.4□□□□□ -1.71
LHX3Q9UBR4 AC041039.1-201ENST00000485656 536 ntBASIC4.4□□□□□ -1.71
LHX3Q9UBR4 AC107398.1-201ENST00000486904 505 ntBASIC4.4□□□□□ -1.71
LHX3Q9UBR4 AC026979.1-201ENST00000492525 396 ntBASIC4.4□□□□□ -1.71
LHX3Q9UBR4 RN7SL691P-201ENST00000494487 301 ntBASIC4.4□□□□□ -1.71
LHX3Q9UBR4 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.4□□□□□ -1.71
LHX3Q9UBR4 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.4□□□□□ -1.71
LHX3Q9UBR4 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.4□□□□□ -1.71
LHX3Q9UBR4 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.4□□□□□ -1.71
LHX3Q9UBR4 AL352979.3-201ENST00000553515 247 ntBASIC4.4□□□□□ -1.71
LHX3Q9UBR4 RPL21P7-201ENST00000557463 483 ntBASIC4.4□□□□□ -1.71
LHX3Q9UBR4 LINC00557-201ENST00000563184 1279 ntBASIC4.4□□□□□ -1.71
LHX3Q9UBR4 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.4□□□□□ -1.71
LHX3Q9UBR4 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.4□□□□□ -1.71
LHX3Q9UBR4 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.4□□□□□ -1.71
LHX3Q9UBR4 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.4□□□□□ -1.71
LHX3Q9UBR4 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.4□□□□□ -1.71
LHX3Q9UBR4 KPNA2P3-201ENST00000584190 848 ntBASIC4.4□□□□□ -1.71
LHX3Q9UBR4 MIR3138-201ENST00000585238 82 ntBASIC4.4□□□□□ -1.71
LHX3Q9UBR4 SUMO2P14-201ENST00000604488 293 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms