Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 CASC19-284ENST00000642142 1868 ntBASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 MIR133A2-201ENST00000347538 102 ntBASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 SNORA64.1-201ENST00000362600 132 ntBASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 RNU5D-1-201ENST00000363299 116 ntBASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 RNA5SP30-201ENST00000365552 115 ntBASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 RNU6-1300P-201ENST00000391046 108 ntBASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 MIR1303-201ENST00000408625 86 ntBASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 SDHDP6-201ENST00000414693 480 ntBASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 NPM1P22-201ENST00000427761 952 ntBASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 USP9YP35-201ENST00000435696 412 ntBASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 USP9YP29-201ENST00000445112 563 ntBASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 RPL23AP35-201ENST00000451906 501 ntBASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 AC113430.1-201ENST00000506872 718 ntBASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 AC011411.1-201ENST00000509592 876 ntBASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 RNU6-615P-201ENST00000516065 106 ntBASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 RNA5SP135-201ENST00000517019 125 ntBASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 MRPS16P1-201ENST00000523462 412 ntBASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 AP001207.1-201ENST00000524051 481 ntBASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 AL512347.1-201ENST00000566420 503 ntBASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 MIR3614-201ENST00000581261 86 ntBASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 AC068276.1-201ENST00000605793 379 ntBASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 AP004247.3-201ENST00000608682 624 ntBASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 AC138749.5-201ENST00000611461 208 ntBASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 AC124312.6-202ENST00000623624 418 ntBASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 AC027228.2-201ENST00000567141 2154 ntBASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.88□□□□□ -1.47
PPARGC1AQ9UBK2 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 AC011933.2-201ENST00000578539 2790 ntBASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 RNU1-136P-201ENST00000384181 164 ntBASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 Y_RNA.516-201ENST00000384541 124 ntBASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 AL031985.1-201ENST00000392713 418 ntBASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 RNF10P1-201ENST00000418589 369 ntBASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 AC138761.5-201ENST00000433967 325 ntBASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 AC022431.1-201ENST00000450941 438 ntBASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 RPL7AP10-201ENST00000481016 791 ntBASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 DUTP1-201ENST00000493631 470 ntBASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 AL035404.1-201ENST00000497982 568 ntBASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 TCP11X3P-202ENST00000514289 1254 ntBASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 AC138832.1-201ENST00000522871 556 ntBASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 OR5AK1P-201ENST00000524837 922 ntBASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 AC245505.1-201ENST00000556398 224 ntBASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 AC010547.6-201ENST00000571789 193 ntBASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 Z95327.3-201ENST00000610385 572 ntBASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 Z99129.1-201ENST00000612510 255 ntBASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 HSPA8P17-201ENST00000427029 1382 ntBASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PPARGC1AQ9UBK2 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms