Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
CUEDC1Q9NWM3 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 AC097461.1-201ENST00000568928 2821 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 Y_RNA.25-201ENST00000362528 102 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 RNU6-492P-201ENST00000363035 104 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 Y_RNA.231-201ENST00000364358 102 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 SNORA63.7-201ENST00000365579 123 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 Y_RNA.381-201ENST00000365666 102 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 RNU6-1158P-201ENST00000391167 107 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 RPL9P21-201ENST00000392269 505 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 MIR1305-201ENST00000408300 86 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 MIR1204-201ENST00000408388 67 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 RN7SKP148-201ENST00000410179 275 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 NDUFB4P5-201ENST00000415445 361 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 REREP1Y-201ENST00000422655 198 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 OR10T1P-201ENST00000424327 947 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 PUDPP2-201ENST00000431423 643 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 REREP2Y-201ENST00000439103 200 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 RPS24P13-201ENST00000442520 397 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 AL845321.1-201ENST00000444603 348 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 AL136380.1-201ENST00000447970 162 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 SLC31A1P1-201ENST00000451221 567 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 RPL26P30-201ENST00000453533 435 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 RPL31P11-202ENST00000454082 372 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 RPL37P3-201ENST00000456825 293 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 AC021074.2-201ENST00000468434 172 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 MTND4P17-201ENST00000470444 350 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 RPS14P8-201ENST00000478778 369 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 RN7SL502P-201ENST00000481857 290 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 AC005912.1-201ENST00000495392 255 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 IGHVIII-25-1-201ENST00000522143 241 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 AP002404.1-201ENST00000532005 451 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 AP001180.3-201ENST00000582221 145 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 MIR4271-201ENST00000582451 67 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 UBE2L4-201ENST00000587688 464 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 AC115621.1-201ENST00000604653 858 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 AC018926.3-201ENST00000618841 406 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 AC231657.1-201ENST00000624313 397 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 CDRT1-208ENST00000630868 794 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 MIR665-201ENST00000635949 72 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 TAB3P1-202ENST00000452645 1634 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 MAPK10-323ENST00000641493 3207 ntBASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CUEDC1Q9NWM3 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms