Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC016588.2-201ENST00000632484 3021 ntBASIC3.01□□□□□ -1.93
SND1-IT1Q9HBX3 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.01□□□□□ -1.93
SND1-IT1Q9HBX3 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SND1-IT1Q9HBX3 NCLP2-201ENST00000416078 1462 ntBASIC3.01□□□□□ -1.93
SND1-IT1Q9HBX3 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SND1-IT1Q9HBX3 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SND1-IT1Q9HBX3 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.01□□□□□ -1.93
SND1-IT1Q9HBX3 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SND1-IT1Q9HBX3 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.01□□□□□ -1.93
SND1-IT1Q9HBX3 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
SND1-IT1Q9HBX3 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SND1-IT1Q9HBX3 AL391684.1-202ENST00000641293 1636 ntBASIC3.01□□□□□ -1.93
SND1-IT1Q9HBX3 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 MFSD4BP1-201ENST00000513330 1552 ntBASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 OR11H5P-202ENST00000641612 1325 ntBASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 ZNF90P1-201ENST00000480493 1951 ntBASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 NXPH1-205ENST00000602349 1953 ntBASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 SNORD115-48-201ENST00000364764 76 ntBASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 GCNT6-201ENST00000379591 934 ntBASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 MIR621-201ENST00000384919 96 ntBASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 MIR223-201ENST00000385204 110 ntBASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 HMGB1P10-201ENST00000395823 563 ntBASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 Z98745.1-201ENST00000402553 494 ntBASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 AC234782.4-201ENST00000417646 1048 ntBASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 LINC01347-201ENST00000417964 355 ntBASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 RPS12P5-201ENST00000423449 371 ntBASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 RPL7P29-201ENST00000437151 728 ntBASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 AURKAPS1-201ENST00000451805 1212 ntBASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 RPS5P7-201ENST00000456664 608 ntBASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 RPS20P4-201ENST00000461659 355 ntBASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 AC110749.1-201ENST00000462007 357 ntBASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 AC079841.1-201ENST00000481228 950 ntBASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 AC027176.2-201ENST00000559166 746 ntBASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 ADAD1P2-201ENST00000588476 646 ntBASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 AC079610.2-201ENST00000604818 690 ntBASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 AC011374.2-201ENST00000607135 526 ntBASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 AP002360.3-201ENST00000607673 710 ntBASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 AC015982.1-201ENST00000608113 465 ntBASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 AC099669.2-201ENST00000616549 437 ntBASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 LINC02471-203ENST00000641941 4752 ntBASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
SND1-IT1Q9HBX3 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SND1-IT1Q9HBX3 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SND1-IT1Q9HBX3 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SND1-IT1Q9HBX3 ANKRD20A10P-201ENST00000457591 1515 ntBASIC2.99□□□□□ -1.93
SND1-IT1Q9HBX3 HSPA8P19-201ENST00000505359 1517 ntBASIC2.99□□□□□ -1.93
SND1-IT1Q9HBX3 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SND1-IT1Q9HBX3 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SND1-IT1Q9HBX3 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC2.99□□□□□ -1.93
SND1-IT1Q9HBX3 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SND1-IT1Q9HBX3 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC2.99□□□□□ -1.93
SND1-IT1Q9HBX3 AC097504.1-201ENST00000515103 2415 ntBASIC2.99□□□□□ -1.93
SND1-IT1Q9HBX3 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
SND1-IT1Q9HBX3 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC2.99□□□□□ -1.93
SND1-IT1Q9HBX3 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
SND1-IT1Q9HBX3 SNORA74A-201ENST00000364089 198 ntBASIC2.99□□□□□ -1.93
SND1-IT1Q9HBX3 U3.15-201ENST00000365398 212 ntBASIC2.99□□□□□ -1.93
SND1-IT1Q9HBX3 RNA5SP151-201ENST00000365632 117 ntBASIC2.99□□□□□ -1.93
SND1-IT1Q9HBX3 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SND1-IT1Q9HBX3 RNU6-98P-201ENST00000384173 107 ntBASIC2.99□□□□□ -1.93
SND1-IT1Q9HBX3 HMGB1P13-201ENST00000406019 642 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms