Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AL354766.1-201ENST00000423396 542 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 RPL12P16-201ENST00000431098 498 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 AL138787.1-202ENST00000437804 898 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 OR7E125P-201ENST00000443450 846 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 AL034418.1-201ENST00000448675 860 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 PDSS1P2-201ENST00000449397 678 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 PPIAP27-201ENST00000453800 265 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 AC023194.2-201ENST00000465398 406 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 PFN1P6-201ENST00000476786 399 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 TRBV5-2-201ENST00000489095 273 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 AC008629.2-201ENST00000503783 483 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 RPL7L1P13-201ENST00000511702 739 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 AC025465.4-201ENST00000513422 638 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 AC010342.1-201ENST00000514047 877 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 RN7SKP70-201ENST00000516655 271 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 IGHV3-63-201ENST00000518422 341 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 AC136777.2-201ENST00000522979 358 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 AP002748.2-201ENST00000528671 348 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 MIR3913-1-201ENST00000577744 102 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 AP005119.1-201ENST00000580956 292 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 AC020914.6-201ENST00000594327 272 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 AC090578.1-201ENST00000604955 591 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 TAS2R6P-201ENST00000605022 826 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 AL390208.1-201ENST00000605885 644 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 AC007038.2-201ENST00000608095 740 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 AC128687.2-201ENST00000609657 566 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 AL353726.1-201ENST00000614041 1000 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 AL121890.2-201ENST00000617644 465 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 AC126177.8-201ENST00000618339 1015 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 SNX18P12-201ENST00000624821 759 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 GTF2H2B-203ENST00000508065 1432 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 SPATA2P1-201ENST00000431223 2055 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 AC092326.2-201ENST00000624772 1561 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 AP000473.2-201ENST00000602659 1537 ntBASIC5.28□□□□□ -1.56
SEC61A2Q9H9S3 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 AL161756.3-201ENST00000641216 2071 ntBASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 GVINP1-202ENST00000531871 7271 ntBASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 Y_RNA.9-201ENST00000362354 101 ntBASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 SNORA40.3-201ENST00000390964 122 ntBASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 RPL23AP47-201ENST00000408017 460 ntBASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 MIR1284-201ENST00000408337 120 ntBASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 SNORA11C-201ENST00000408532 129 ntBASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 AC068533.2-201ENST00000411872 306 ntBASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 OFD1P18Y-201ENST00000420889 959 ntBASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 AC007742.1-201ENST00000425789 329 ntBASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 AC099677.3-201ENST00000427081 395 ntBASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 VTI1BP4-201ENST00000427516 527 ntBASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 FMO7P-201ENST00000436045 768 ntBASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 ELOCP26-201ENST00000436067 329 ntBASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 MTCO3P18-201ENST00000440206 761 ntBASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 ZNF733P-202ENST00000444809 1573 ntBASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 DPPA3P1-201ENST00000448050 469 ntBASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 HLA-DPA3-207ENST00000454398 229 ntBASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 AC013267.1-201ENST00000458227 267 ntBASIC5.27□□□□□ -1.57
SEC61A2Q9H9S3 AP000797.1-201ENST00000478870 387 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms