Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC6.21□□□□□ -1.42
SCAPERQ9BY12 HMGN2P31-201ENST00000432430 273 ntBASIC6.21□□□□□ -1.42
SCAPERQ9BY12 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.21□□□□□ -1.42
SCAPERQ9BY12 AC007967.1-201ENST00000455422 1159 ntBASIC6.21□□□□□ -1.42
SCAPERQ9BY12 NPM1P29-201ENST00000483112 803 ntBASIC6.21□□□□□ -1.42
SCAPERQ9BY12 RN7SL323P-201ENST00000494712 295 ntBASIC6.21□□□□□ -1.42
SCAPERQ9BY12 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SCAPERQ9BY12 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC6.21□□□□□ -1.42
SCAPERQ9BY12 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC6.21□□□□□ -1.42
SCAPERQ9BY12 SETP1-201ENST00000556014 845 ntBASIC6.21□□□□□ -1.42
SCAPERQ9BY12 VN1R92P-201ENST00000598511 928 ntBASIC6.21□□□□□ -1.42
SCAPERQ9BY12 AL159169.3-201ENST00000608871 561 ntBASIC6.21□□□□□ -1.42
SCAPERQ9BY12 AC018816.2-201ENST00000621460 353 ntBASIC6.21□□□□□ -1.42
SCAPERQ9BY12 U6.105-201ENST00000637379 88 ntBASIC6.21□□□□□ -1.42
SCAPERQ9BY12 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
SCAPERQ9BY12 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC6.21□□□□□ -1.42
SCAPERQ9BY12 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
SCAPERQ9BY12 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SCAPERQ9BY12 SETP15-201ENST00000412724 337 ntBASIC6.2□□□□□ -1.42
SCAPERQ9BY12 PRDX3P3-201ENST00000447765 522 ntBASIC6.2□□□□□ -1.42
SCAPERQ9BY12 RPS4XP18-201ENST00000495480 763 ntBASIC6.2□□□□□ -1.42
SCAPERQ9BY12 BNIP3P41-201ENST00000503774 571 ntBASIC6.2□□□□□ -1.42
SCAPERQ9BY12 ATP6V1G1P6-201ENST00000504007 334 ntBASIC6.2□□□□□ -1.42
SCAPERQ9BY12 SNORA70.24-201ENST00000517233 118 ntBASIC6.2□□□□□ -1.42
SCAPERQ9BY12 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC6.2□□□□□ -1.42
SCAPERQ9BY12 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC6.2□□□□□ -1.42
SCAPERQ9BY12 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SCAPERQ9BY12 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.2□□□□□ -1.42
SCAPERQ9BY12 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SCAPERQ9BY12 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SCAPERQ9BY12 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
SCAPERQ9BY12 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SCAPERQ9BY12 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SCAPERQ9BY12 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.2□□□□□ -1.42
SCAPERQ9BY12 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SCAPERQ9BY12 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
SCAPERQ9BY12 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SCAPERQ9BY12 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC6.19□□□□□ -1.42
SCAPERQ9BY12 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SCAPERQ9BY12 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SCAPERQ9BY12 LINC00561-201ENST00000565815 2738 ntBASIC6.19□□□□□ -1.42
SCAPERQ9BY12 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
SCAPERQ9BY12 RPL21P17-201ENST00000397467 475 ntBASIC6.19□□□□□ -1.42
SCAPERQ9BY12 VDAC1P9-201ENST00000412766 841 ntBASIC6.19□□□□□ -1.42
SCAPERQ9BY12 AL450992.3-201ENST00000413192 568 ntBASIC6.19□□□□□ -1.42
SCAPERQ9BY12 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC6.19□□□□□ -1.42
SCAPERQ9BY12 AL451050.1-201ENST00000450126 415 ntBASIC6.19□□□□□ -1.42
SCAPERQ9BY12 AC112206.1-201ENST00000468416 477 ntBASIC6.19□□□□□ -1.42
SCAPERQ9BY12 KRT19P6-201ENST00000510983 209 ntBASIC6.19□□□□□ -1.42
SCAPERQ9BY12 CYCSP30-201ENST00000546447 172 ntBASIC6.19□□□□□ -1.42
SCAPERQ9BY12 AC090312.1-201ENST00000580637 348 ntBASIC6.19□□□□□ -1.42
SCAPERQ9BY12 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC6.19□□□□□ -1.42
SCAPERQ9BY12 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC6.19□□□□□ -1.42
SCAPERQ9BY12 AC114878.2-201ENST00000604863 1251 ntBASIC6.19□□□□□ -1.42
SCAPERQ9BY12 AC005972.3-201ENST00000606304 481 ntBASIC6.19□□□□□ -1.42
SCAPERQ9BY12 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC6.19□□□□□ -1.42
SCAPERQ9BY12 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC6.19□□□□□ -1.42
SCAPERQ9BY12 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC6.19□□□□□ -1.42
SCAPERQ9BY12 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC6.19□□□□□ -1.42
SCAPERQ9BY12 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SCAPERQ9BY12 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC6.19□□□□□ -1.42
SCAPERQ9BY12 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
SCAPERQ9BY12 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SCAPERQ9BY12 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.19□□□□□ -1.42
SCAPERQ9BY12 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
SCAPERQ9BY12 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SCAPERQ9BY12 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC6.18□□□□□ -1.42
SCAPERQ9BY12 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC6.18□□□□□ -1.42
SCAPERQ9BY12 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.18□□□□□ -1.42
SCAPERQ9BY12 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC6.18□□□□□ -1.42
SCAPERQ9BY12 RPS26P2-201ENST00000440331 348 ntBASIC6.18□□□□□ -1.42
SCAPERQ9BY12 ASNSP4-201ENST00000511103 447 ntBASIC6.18□□□□□ -1.42
SCAPERQ9BY12 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC6.18□□□□□ -1.42
SCAPERQ9BY12 DPRXP4-201ENST00000578053 568 ntBASIC6.18□□□□□ -1.42
SCAPERQ9BY12 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC6.18□□□□□ -1.42
SCAPERQ9BY12 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC6.18□□□□□ -1.42
SCAPERQ9BY12 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SCAPERQ9BY12 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
SCAPERQ9BY12 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
SCAPERQ9BY12 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SCAPERQ9BY12 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SCAPERQ9BY12 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC6.17□□□□□ -1.42
SCAPERQ9BY12 RNU1-44P-201ENST00000384453 163 ntBASIC6.17□□□□□ -1.42
SCAPERQ9BY12 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC6.17□□□□□ -1.42
SCAPERQ9BY12 OR4F13P-201ENST00000428478 931 ntBASIC6.17□□□□□ -1.42
SCAPERQ9BY12 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC6.17□□□□□ -1.42
SCAPERQ9BY12 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC6.17□□□□□ -1.42
SCAPERQ9BY12 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC6.17□□□□□ -1.42
SCAPERQ9BY12 ARL4AP1-201ENST00000503220 705 ntBASIC6.17□□□□□ -1.42
SCAPERQ9BY12 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC6.17□□□□□ -1.42
SCAPERQ9BY12 TRAPPC2P2-201ENST00000517589 409 ntBASIC6.17□□□□□ -1.42
SCAPERQ9BY12 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC6.17□□□□□ -1.42
SCAPERQ9BY12 YPEL5P3-201ENST00000547227 352 ntBASIC6.17□□□□□ -1.42
SCAPERQ9BY12 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC6.17□□□□□ -1.42
SCAPERQ9BY12 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC6.17□□□□□ -1.42
SCAPERQ9BY12 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC6.17□□□□□ -1.42
SCAPERQ9BY12 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC6.17□□□□□ -1.42
SCAPERQ9BY12 AL442067.2-201ENST00000614033 363 ntBASIC6.17□□□□□ -1.42
SCAPERQ9BY12 AL645927.2-201ENST00000618350 349 ntBASIC6.17□□□□□ -1.42
SCAPERQ9BY12 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms