Protein–RNA interactions for Protein: Q9BQS8

FYCO1, FYVE and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 1,478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1Q9BQS8 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
FYCO1Q9BQS8 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
FYCO1Q9BQS8 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
FYCO1Q9BQS8 GAPDHP36-201ENST00000480688 918 ntBASIC6.19□□□□□ -1.42
FYCO1Q9BQS8 OR5D2P-201ENST00000524390 911 ntBASIC6.19□□□□□ -1.42
FYCO1Q9BQS8 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.19□□□□□ -1.42
FYCO1Q9BQS8 PACRG-211ENST00000621363 360 ntTSL 5 BASIC6.19□□□□□ -1.42
FYCO1Q9BQS8 AP003400.2-201ENST00000624036 666 ntBASIC6.19□□□□□ -1.42
FYCO1Q9BQS8 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
FYCO1Q9BQS8 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
FYCO1Q9BQS8 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
FYCO1Q9BQS8 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
FYCO1Q9BQS8 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
FYCO1Q9BQS8 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
FYCO1Q9BQS8 SNORA5A-201ENST00000384111 134 ntBASIC6.18□□□□□ -1.42
FYCO1Q9BQS8 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.18□□□□□ -1.42
FYCO1Q9BQS8 SNORA57.3-201ENST00000411095 141 ntBASIC6.18□□□□□ -1.42
FYCO1Q9BQS8 GCA-203ENST00000429691 824 ntTSL 3 BASIC6.18□□□□□ -1.42
FYCO1Q9BQS8 MAPRE1P3-201ENST00000435438 796 ntBASIC6.18□□□□□ -1.42
FYCO1Q9BQS8 CYCSP43-201ENST00000438233 310 ntBASIC6.18□□□□□ -1.42
FYCO1Q9BQS8 RPS17P13-201ENST00000448974 407 ntBASIC6.18□□□□□ -1.42
FYCO1Q9BQS8 RPL7P15-201ENST00000461190 712 ntBASIC6.18□□□□□ -1.42
FYCO1Q9BQS8 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
FYCO1Q9BQS8 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC6.18□□□□□ -1.42
FYCO1Q9BQS8 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC6.18□□□□□ -1.42
FYCO1Q9BQS8 AC021146.3-201ENST00000511911 260 ntBASIC6.18□□□□□ -1.42
FYCO1Q9BQS8 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
FYCO1Q9BQS8 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC6.18□□□□□ -1.42
FYCO1Q9BQS8 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.18□□□□□ -1.42
FYCO1Q9BQS8 NPM1P47-201ENST00000560843 856 ntBASIC6.18□□□□□ -1.42
FYCO1Q9BQS8 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC6.18□□□□□ -1.42
FYCO1Q9BQS8 AC007066.2-202ENST00000566531 914 ntBASIC6.18□□□□□ -1.42
FYCO1Q9BQS8 AL049634.3-201ENST00000604968 457 ntBASIC6.18□□□□□ -1.42
FYCO1Q9BQS8 AC005344.1-201ENST00000613391 459 ntBASIC6.18□□□□□ -1.42
FYCO1Q9BQS8 CR392039.5-201ENST00000623201 510 ntBASIC6.18□□□□□ -1.42
FYCO1Q9BQS8 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
FYCO1Q9BQS8 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
FYCO1Q9BQS8 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC6.18□□□□□ -1.42
FYCO1Q9BQS8 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
FYCO1Q9BQS8 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
FYCO1Q9BQS8 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC6.17□□□□□ -1.42
FYCO1Q9BQS8 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC6.17□□□□□ -1.42
FYCO1Q9BQS8 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
FYCO1Q9BQS8 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
FYCO1Q9BQS8 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
FYCO1Q9BQS8 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
FYCO1Q9BQS8 MIR449B-201ENST00000384995 97 ntBASIC6.17□□□□□ -1.42
FYCO1Q9BQS8 RPL23AP83-201ENST00000434984 473 ntBASIC6.17□□□□□ -1.42
FYCO1Q9BQS8 Z74696.2-201ENST00000436514 498 ntBASIC6.17□□□□□ -1.42
FYCO1Q9BQS8 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC6.17□□□□□ -1.42
FYCO1Q9BQS8 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC6.17□□□□□ -1.42
FYCO1Q9BQS8 RPL7P24-201ENST00000493052 752 ntBASIC6.17□□□□□ -1.42
FYCO1Q9BQS8 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
FYCO1Q9BQS8 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
FYCO1Q9BQS8 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC6.17□□□□□ -1.42
FYCO1Q9BQS8 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC6.17□□□□□ -1.42
FYCO1Q9BQS8 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC6.17□□□□□ -1.42
FYCO1Q9BQS8 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC6.17□□□□□ -1.42
FYCO1Q9BQS8 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
FYCO1Q9BQS8 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
FYCO1Q9BQS8 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
FYCO1Q9BQS8 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
FYCO1Q9BQS8 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
FYCO1Q9BQS8 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.17□□□□□ -1.42
FYCO1Q9BQS8 AC093591.2-201ENST00000565254 3843 ntBASIC6.17□□□□□ -1.42
FYCO1Q9BQS8 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.16□□□□□ -1.42
FYCO1Q9BQS8 RN7SKP74-201ENST00000362849 309 ntBASIC6.16□□□□□ -1.42
FYCO1Q9BQS8 SNORD46.1-201ENST00000364139 104 ntBASIC6.16□□□□□ -1.42
FYCO1Q9BQS8 PTMAP2-201ENST00000397627 327 ntBASIC6.16□□□□□ -1.42
FYCO1Q9BQS8 SNORA11.1-201ENST00000408133 129 ntBASIC6.16□□□□□ -1.42
FYCO1Q9BQS8 HIGD1AP4-201ENST00000430194 280 ntBASIC6.16□□□□□ -1.42
FYCO1Q9BQS8 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC6.16□□□□□ -1.42
FYCO1Q9BQS8 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC6.16□□□□□ -1.42
FYCO1Q9BQS8 AC109635.6-201ENST00000525487 1113 ntBASIC6.16□□□□□ -1.42
FYCO1Q9BQS8 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.16□□□□□ -1.42
FYCO1Q9BQS8 AC008739.3-201ENST00000603262 127 ntBASIC6.16□□□□□ -1.42
FYCO1Q9BQS8 AC124312.6-202ENST00000623624 418 ntBASIC6.16□□□□□ -1.42
FYCO1Q9BQS8 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
FYCO1Q9BQS8 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
FYCO1Q9BQS8 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
FYCO1Q9BQS8 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
FYCO1Q9BQS8 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
FYCO1Q9BQS8 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC6.16□□□□□ -1.42
FYCO1Q9BQS8 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
FYCO1Q9BQS8 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
FYCO1Q9BQS8 SAMMSON-213ENST00000641336 1521 ntBASIC6.16□□□□□ -1.42
FYCO1Q9BQS8 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
FYCO1Q9BQS8 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
FYCO1Q9BQS8 SNORA73.2-201ENST00000364946 201 ntBASIC6.15□□□□□ -1.42
FYCO1Q9BQS8 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC6.15□□□□□ -1.42
FYCO1Q9BQS8 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC6.15□□□□□ -1.42
FYCO1Q9BQS8 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC6.15□□□□□ -1.42
FYCO1Q9BQS8 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC6.15□□□□□ -1.42
FYCO1Q9BQS8 GAS5-223ENST00000452197 483 ntTSL 3 BASIC6.15□□□□□ -1.42
FYCO1Q9BQS8 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC6.15□□□□□ -1.42
FYCO1Q9BQS8 PPIAP15-201ENST00000479662 484 ntBASIC6.15□□□□□ -1.42
FYCO1Q9BQS8 AC026782.2-201ENST00000510845 636 ntBASIC6.15□□□□□ -1.42
FYCO1Q9BQS8 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC6.15□□□□□ -1.42
FYCO1Q9BQS8 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC6.15□□□□□ -1.42
FYCO1Q9BQS8 AL049781.1-201ENST00000623195 3585 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms