Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.94□□□□□ -1.62
SNX18Q96RF0 AC127526.2-201ENST00000426436 775 ntBASIC4.94□□□□□ -1.62
SNX18Q96RF0 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.94□□□□□ -1.62
SNX18Q96RF0 FAM96AP1-201ENST00000430879 482 ntBASIC4.94□□□□□ -1.62
SNX18Q96RF0 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.94□□□□□ -1.62
SNX18Q96RF0 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.94□□□□□ -1.62
SNX18Q96RF0 SUMO2P3-201ENST00000438311 288 ntBASIC4.94□□□□□ -1.62
SNX18Q96RF0 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.94□□□□□ -1.62
SNX18Q96RF0 AP000281.1-201ENST00000444036 316 ntBASIC4.94□□□□□ -1.62
SNX18Q96RF0 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
SNX18Q96RF0 AC009961.3-201ENST00000449832 765 ntBASIC4.94□□□□□ -1.62
SNX18Q96RF0 AL591623.2-201ENST00000449978 222 ntBASIC4.94□□□□□ -1.62
SNX18Q96RF0 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SNX18Q96RF0 AC097262.1-201ENST00000452559 548 ntBASIC4.94□□□□□ -1.62
SNX18Q96RF0 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.94□□□□□ -1.62
SNX18Q96RF0 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.94□□□□□ -1.62
SNX18Q96RF0 MTCO3P16-201ENST00000454456 754 ntBASIC4.94□□□□□ -1.62
SNX18Q96RF0 AC022795.1-201ENST00000473808 480 ntBASIC4.94□□□□□ -1.62
SNX18Q96RF0 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.94□□□□□ -1.62
SNX18Q96RF0 AC090114.3-201ENST00000479267 829 ntBASIC4.94□□□□□ -1.62
SNX18Q96RF0 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.94□□□□□ -1.62
SNX18Q96RF0 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.94□□□□□ -1.62
SNX18Q96RF0 RPS4XP14-201ENST00000493072 781 ntBASIC4.94□□□□□ -1.62
SNX18Q96RF0 RPS24P16-201ENST00000497294 392 ntBASIC4.94□□□□□ -1.62
SNX18Q96RF0 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.94□□□□□ -1.62
SNX18Q96RF0 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SNX18Q96RF0 AC116353.3-201ENST00000511215 249 ntBASIC4.94□□□□□ -1.62
SNX18Q96RF0 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SNX18Q96RF0 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.94□□□□□ -1.62
SNX18Q96RF0 RNU6-615P-201ENST00000516065 106 ntBASIC4.94□□□□□ -1.62
SNX18Q96RF0 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.94□□□□□ -1.62
SNX18Q96RF0 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.94□□□□□ -1.62
SNX18Q96RF0 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.94□□□□□ -1.62
SNX18Q96RF0 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SNX18Q96RF0 AP000619.3-201ENST00000535634 1127 ntBASIC4.94□□□□□ -1.62
SNX18Q96RF0 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.94□□□□□ -1.62
SNX18Q96RF0 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.94□□□□□ -1.62
SNX18Q96RF0 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.94□□□□□ -1.62
SNX18Q96RF0 NPM1P47-201ENST00000560843 856 ntBASIC4.94□□□□□ -1.62
SNX18Q96RF0 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.94□□□□□ -1.62
SNX18Q96RF0 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.94□□□□□ -1.62
SNX18Q96RF0 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.94□□□□□ -1.62
SNX18Q96RF0 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
SNX18Q96RF0 VN1R88P-201ENST00000596787 292 ntBASIC4.94□□□□□ -1.62
SNX18Q96RF0 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.94□□□□□ -1.62
SNX18Q96RF0 AC006539.2-201ENST00000601729 572 ntBASIC4.94□□□□□ -1.62
SNX18Q96RF0 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.94□□□□□ -1.62
SNX18Q96RF0 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.94□□□□□ -1.62
SNX18Q96RF0 AC009163.6-201ENST00000612367 342 ntBASIC4.94□□□□□ -1.62
SNX18Q96RF0 AC007494.3-201ENST00000624660 743 ntBASIC4.94□□□□□ -1.62
SNX18Q96RF0 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.94□□□□□ -1.62
SNX18Q96RF0 AC087565.3-203ENST00000641018 837 ntBASIC4.94□□□□□ -1.62
SNX18Q96RF0 AC100757.1-201ENST00000616872 1835 ntBASIC4.94□□□□□ -1.62
SNX18Q96RF0 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SNX18Q96RF0 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SNX18Q96RF0 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.94□□□□□ -1.62
SNX18Q96RF0 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.94□□□□□ -1.62
SNX18Q96RF0 AC026523.2-201ENST00000625039 7739 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.93□□□□□ -1.62
SNX18Q96RF0 MAPK10-349ENST00000641767 3661 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNX18Q96RF0 VPS35P1-201ENST00000563400 1518 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SNX18Q96RF0 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SNX18Q96RF0 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.93□□□□□ -1.62
SNX18Q96RF0 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
SNX18Q96RF0 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SNX18Q96RF0 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNX18Q96RF0 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNX18Q96RF0 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNX18Q96RF0 Y_RNA.77-201ENST00000362962 107 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 RNU6-560P-201ENST00000364007 108 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 RNU6-304P-201ENST00000364855 107 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 MIR551A-201ENST00000385042 96 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 RPS3AP26-201ENST00000398259 784 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 AL078599.1-201ENST00000402075 293 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 HMGB1P20-201ENST00000402555 677 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 PPIAP9-201ENST00000403866 498 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 GSTA8P-201ENST00000404253 637 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 SNORA11B-201ENST00000408175 129 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.93□□□□□ -1.62
SNX18Q96RF0 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.93□□□□□ -1.62
SNX18Q96RF0 AC114814.2-201ENST00000419195 485 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 PAICSP7-201ENST00000419829 962 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.93□□□□□ -1.62
SNX18Q96RF0 GAPDHP49-201ENST00000421421 961 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SNX18Q96RF0 GTF2IP23-201ENST00000423746 351 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 AL121776.1-201ENST00000429337 372 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 DLGAP5P1-201ENST00000430307 464 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.93□□□□□ -1.62
SNX18Q96RF0 HMGB3P24-201ENST00000433260 622 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 AC098826.1-201ENST00000433943 471 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNX18Q96RF0 GTF2IP7-202ENST00000436677 309 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.93□□□□□ -1.62
SNX18Q96RF0 MTND2P19-201ENST00000449129 1012 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.93□□□□□ -1.62
SNX18Q96RF0 AL935212.3-201ENST00000450729 284 ntBASIC4.93□□□□□ -1.62
SNX18Q96RF0 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms