Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 OR9K1P-201ENST00000326513 941 ntBASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 U3.2-201ENST00000362981 210 ntBASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 U3.3-201ENST00000362986 216 ntBASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 RNU6-623P-201ENST00000363143 105 ntBASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 RNU6-171P-201ENST00000384354 107 ntBASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 SNORD65.1-201ENST00000390889 71 ntBASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 OR51A3P-201ENST00000413596 924 ntBASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 AC079809.1-201ENST00000415468 276 ntBASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 HSFY4P-201ENST00000415994 1181 ntBASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 SLC35E1P1-201ENST00000419313 864 ntBASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 AC108075.1-201ENST00000424692 529 ntBASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 RPP40P1-201ENST00000426762 456 ntBASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 CLUHP1-201ENST00000435012 1190 ntBASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 AL031663.1-201ENST00000437445 219 ntBASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 MTCYBP3-201ENST00000445588 1137 ntBASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 AL035551.1-201ENST00000446931 348 ntBASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 AC097262.1-201ENST00000452559 548 ntBASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 RPS27AP8-201ENST00000452665 445 ntBASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 RPS4XP20-201ENST00000505751 772 ntBASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 AC010587.2-201ENST00000511727 448 ntBASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 EIF3KP3-201ENST00000514461 639 ntBASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 RNU6-759P-201ENST00000516740 103 ntBASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 AC023161.2-201ENST00000551218 780 ntBASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 AC024909.2-201ENST00000553035 286 ntBASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 AL049779.2-201ENST00000553847 315 ntBASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 MIR1269B-201ENST00000580405 75 ntBASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 AL390838.2-201ENST00000602394 274 ntBASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 AL592221.1-201ENST00000605266 382 ntBASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 AL451049.1-201ENST00000608672 497 ntBASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 AC097505.1-201ENST00000610199 565 ntBASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 AC023158.2-201ENST00000614876 543 ntBASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 AC015726.3-201ENST00000624501 418 ntBASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 AP003072.4-201ENST00000624580 310 ntBASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.91□□□□□ -1.62
CTHRC1Q96CG8 PABPC1P6-201ENST00000445594 1829 ntBASIC4.9□□□□□ -1.62
CTHRC1Q96CG8 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
CTHRC1Q96CG8 AC007342.5-201ENST00000571340 2142 ntBASIC4.9□□□□□ -1.62
CTHRC1Q96CG8 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.9□□□□□ -1.62
CTHRC1Q96CG8 OR56B2P-201ENST00000317102 954 ntBASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 RNU6-553P-201ENST00000364047 96 ntBASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 RNU1-74P-201ENST00000384108 171 ntBASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 MIR105-1-201ENST00000385222 81 ntBASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 NUDT19P3-201ENST00000404698 555 ntBASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 RNA5SP80-201ENST00000410475 111 ntBASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 BTF3L4P1-201ENST00000413813 468 ntBASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 AL161722.2-201ENST00000434731 981 ntBASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 ELOCP8-201ENST00000439309 332 ntBASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 ELOCP15-201ENST00000442090 332 ntBASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 TPMTP4-201ENST00000450749 678 ntBASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 RFC5P1-201ENST00000454419 874 ntBASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 AL161747.1-201ENST00000480068 358 ntBASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 MTND5P13-201ENST00000513046 1079 ntBASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 HNRNPKP5-201ENST00000515300 253 ntBASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 COX6B1P6-201ENST00000522347 255 ntBASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 AC004825.1-201ENST00000555068 586 ntBASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms