Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 AC011840.5-201ENST00000582125 771 ntBASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 AC090312.2-201ENST00000582687 378 ntBASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 CCDC58P3-201ENST00000590792 430 ntBASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 AC002487.1-201ENST00000604565 994 ntBASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 ZNF663P-202ENST00000641770 1131 ntBASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 AC093775.1-201ENST00000624154 1868 ntBASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CHMP4CQ96CF2 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 RNU6-636P-201ENST00000384598 107 ntBASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 MIR585-201ENST00000384887 94 ntBASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 AF228730.1-201ENST00000397972 663 ntBASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 MIR937-201ENST00000401271 86 ntBASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 HIGD1AP12-201ENST00000427832 281 ntBASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 FHP1-201ENST00000442741 703 ntBASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 AL589880.1-201ENST00000448271 287 ntBASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 NPM1P13-201ENST00000452663 865 ntBASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 AL354710.1-201ENST00000453641 246 ntBASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 AC096992.1-201ENST00000459808 709 ntBASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 HMGN2P25-201ENST00000486956 268 ntBASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 AC069304.1-201ENST00000491593 704 ntBASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 AC105233.1-201ENST00000498840 781 ntBASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 AL671862.1-201ENST00000515851 349 ntBASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 snoU109.6-201ENST00000516831 118 ntBASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 VN1R88P-201ENST00000596787 292 ntBASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 AC008536.1-201ENST00000602872 669 ntBASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 AL583856.2-201ENST00000606298 543 ntBASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 AC093799.2-201ENST00000610062 578 ntBASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 AL121895.2-201ENST00000619558 447 ntBASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 AC092608.3-201ENST00000625017 386 ntBASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 AC138393.1-206ENST00000540997 1886 ntBASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 FTX-210ENST00000603037 8347 ntTSL 5 BASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CHMP4CQ96CF2 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 AC006042.3-201ENST00000454684 1469 ntBASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 AC104446.1-201ENST00000613728 1321 ntBASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 RN7SKP103-201ENST00000363848 320 ntBASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 RNU6-304P-201ENST00000364855 107 ntBASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 SNORA51.8-201ENST00000384234 132 ntBASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 Y_RNA.472-201ENST00000384322 102 ntBASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 AL136310.1-201ENST00000404926 654 ntBASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 AC114814.2-201ENST00000419195 485 ntBASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 OR2X1P-201ENST00000421144 687 ntBASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 HMGB1P45-201ENST00000435986 653 ntBASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 AC073052.1-201ENST00000440417 714 ntBASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 MTND1P26-201ENST00000440488 538 ntBASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 AP000942.1-201ENST00000463969 747 ntBASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 RN7SL443P-201ENST00000464331 290 ntBASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 RPL21P6-201ENST00000479171 504 ntBASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 AC073522.1-201ENST00000483312 377 ntBASIC6.03□□□□□ -1.44
CHMP4CQ96CF2 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms