Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
VPS33AQ96AX1 RNU6-932P-201ENST00000391108 106 ntBASIC4.61□□□□□ -1.67
VPS33AQ96AX1 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS33AQ96AX1 DDX39BP1-205ENST00000422507 192 ntBASIC4.61□□□□□ -1.67
VPS33AQ96AX1 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.61□□□□□ -1.67
VPS33AQ96AX1 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.61□□□□□ -1.67
VPS33AQ96AX1 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS33AQ96AX1 AL121776.1-201ENST00000429337 372 ntBASIC4.61□□□□□ -1.67
VPS33AQ96AX1 UBE2V1P5-201ENST00000440070 405 ntBASIC4.61□□□□□ -1.67
VPS33AQ96AX1 AC002542.1-201ENST00000440683 193 ntBASIC4.61□□□□□ -1.67
VPS33AQ96AX1 AL163193.1-201ENST00000444895 788 ntBASIC4.61□□□□□ -1.67
VPS33AQ96AX1 AC044797.1-201ENST00000445744 679 ntBASIC4.61□□□□□ -1.67
VPS33AQ96AX1 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS33AQ96AX1 AC008280.2-201ENST00000455473 307 ntBASIC4.61□□□□□ -1.67
VPS33AQ96AX1 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VPS33AQ96AX1 AC073522.1-201ENST00000483312 377 ntBASIC4.61□□□□□ -1.67
VPS33AQ96AX1 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.61□□□□□ -1.67
VPS33AQ96AX1 RN7SL558P-201ENST00000497468 299 ntBASIC4.61□□□□□ -1.67
VPS33AQ96AX1 OR5H4P-201ENST00000510851 923 ntBASIC4.61□□□□□ -1.67
VPS33AQ96AX1 HMGB3P13-201ENST00000511263 607 ntBASIC4.61□□□□□ -1.67
VPS33AQ96AX1 MTCO3P27-201ENST00000514397 196 ntBASIC4.61□□□□□ -1.67
VPS33AQ96AX1 AP003355.1-201ENST00000518956 587 ntBASIC4.61□□□□□ -1.67
VPS33AQ96AX1 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS33AQ96AX1 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS33AQ96AX1 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
VPS33AQ96AX1 AC079075.1-201ENST00000559543 878 ntBASIC4.61□□□□□ -1.67
VPS33AQ96AX1 HMGB3P26-201ENST00000560051 582 ntBASIC4.61□□□□□ -1.67
VPS33AQ96AX1 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS33AQ96AX1 AC093249.4-201ENST00000564755 259 ntBASIC4.61□□□□□ -1.67
VPS33AQ96AX1 TVP23CP2-201ENST00000571473 623 ntBASIC4.61□□□□□ -1.67
VPS33AQ96AX1 AC067852.4-201ENST00000590314 478 ntBASIC4.61□□□□□ -1.67
VPS33AQ96AX1 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
VPS33AQ96AX1 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.61□□□□□ -1.67
VPS33AQ96AX1 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS33AQ96AX1 BNIP3P4-201ENST00000604946 565 ntBASIC4.61□□□□□ -1.67
VPS33AQ96AX1 AC009163.6-201ENST00000612367 342 ntBASIC4.61□□□□□ -1.67
VPS33AQ96AX1 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.61□□□□□ -1.67
VPS33AQ96AX1 AC009237.17-201ENST00000618111 748 ntBASIC4.61□□□□□ -1.67
VPS33AQ96AX1 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.61□□□□□ -1.67
VPS33AQ96AX1 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
VPS33AQ96AX1 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS33AQ96AX1 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VPS33AQ96AX1 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VPS33AQ96AX1 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
VPS33AQ96AX1 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS33AQ96AX1 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS33AQ96AX1 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS33AQ96AX1 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.6□□□□□ -1.67
VPS33AQ96AX1 SNURFL-201ENST00000309296 343 ntBASIC4.6□□□□□ -1.67
VPS33AQ96AX1 SNORD65C-201ENST00000390962 71 ntBASIC4.6□□□□□ -1.67
VPS33AQ96AX1 ARL4AP5-201ENST00000404372 599 ntBASIC4.6□□□□□ -1.67
VPS33AQ96AX1 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.6□□□□□ -1.67
VPS33AQ96AX1 AL080315.1-201ENST00000406055 466 ntBASIC4.6□□□□□ -1.67
VPS33AQ96AX1 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.6□□□□□ -1.67
VPS33AQ96AX1 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.6□□□□□ -1.67
VPS33AQ96AX1 RNA5SP345-201ENST00000410646 108 ntBASIC4.6□□□□□ -1.67
VPS33AQ96AX1 CEACAMP8-201ENST00000413902 580 ntBASIC4.6□□□□□ -1.67
VPS33AQ96AX1 AC009237.10-201ENST00000414112 510 ntBASIC4.6□□□□□ -1.67
VPS33AQ96AX1 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.6□□□□□ -1.67
VPS33AQ96AX1 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.6□□□□□ -1.67
VPS33AQ96AX1 BMS1P13-201ENST00000417301 885 ntBASIC4.6□□□□□ -1.67
VPS33AQ96AX1 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC4.6□□□□□ -1.67
VPS33AQ96AX1 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.6□□□□□ -1.67
VPS33AQ96AX1 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS33AQ96AX1 RPL37P1-201ENST00000432310 284 ntBASIC4.6□□□□□ -1.67
VPS33AQ96AX1 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS33AQ96AX1 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS33AQ96AX1 FAR2P1-206ENST00000449736 709 ntBASIC4.6□□□□□ -1.67
VPS33AQ96AX1 AL389915.2-201ENST00000454576 441 ntBASIC4.6□□□□□ -1.67
VPS33AQ96AX1 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS33AQ96AX1 AC126121.1-201ENST00000482313 553 ntBASIC4.6□□□□□ -1.67
VPS33AQ96AX1 RN7SL97P-201ENST00000486780 299 ntBASIC4.6□□□□□ -1.67
VPS33AQ96AX1 RN7SL244P-201ENST00000493405 297 ntBASIC4.6□□□□□ -1.67
VPS33AQ96AX1 MTATP6P22-201ENST00000507369 598 ntBASIC4.6□□□□□ -1.67
VPS33AQ96AX1 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS33AQ96AX1 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.6□□□□□ -1.67
VPS33AQ96AX1 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.6□□□□□ -1.67
VPS33AQ96AX1 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS33AQ96AX1 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.6□□□□□ -1.67
VPS33AQ96AX1 IGKV2-18-201ENST00000522607 343 ntBASIC4.6□□□□□ -1.67
VPS33AQ96AX1 AC090819.1-201ENST00000523800 1111 ntBASIC4.6□□□□□ -1.67
VPS33AQ96AX1 AC124293.1-201ENST00000530034 493 ntBASIC4.6□□□□□ -1.67
VPS33AQ96AX1 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VPS33AQ96AX1 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS33AQ96AX1 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS33AQ96AX1 AC074029.1-201ENST00000552531 1044 ntBASIC4.6□□□□□ -1.67
VPS33AQ96AX1 FKBP1BP1-201ENST00000553366 325 ntBASIC4.6□□□□□ -1.67
VPS33AQ96AX1 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS33AQ96AX1 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS33AQ96AX1 RPL21P7-201ENST00000557463 483 ntBASIC4.6□□□□□ -1.67
VPS33AQ96AX1 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.6□□□□□ -1.67
VPS33AQ96AX1 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS33AQ96AX1 MIR6864-201ENST00000617935 70 ntBASIC4.6□□□□□ -1.67
VPS33AQ96AX1 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.6□□□□□ -1.67
VPS33AQ96AX1 AL049767.1-202ENST00000637826 242 ntBASIC4.6□□□□□ -1.67
VPS33AQ96AX1 AC108751.5-201ENST00000492880 1336 ntBASIC4.6□□□□□ -1.67
VPS33AQ96AX1 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
VPS33AQ96AX1 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
VPS33AQ96AX1 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS33AQ96AX1 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms