Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.53□□□□□ -1.68
TM9SF4Q92544 AL672167.1-205ENST00000641112 3080 ntBASIC4.53□□□□□ -1.68
TM9SF4Q92544 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
TM9SF4Q92544 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TM9SF4Q92544 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TM9SF4Q92544 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
TM9SF4Q92544 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
TM9SF4Q92544 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 AC008432.1-201ENST00000615912 1320 ntBASIC4.52□□□□□ -1.69
TM9SF4Q92544 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TM9SF4Q92544 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TM9SF4Q92544 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TM9SF4Q92544 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TM9SF4Q92544 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TM9SF4Q92544 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TM9SF4Q92544 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
TM9SF4Q92544 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 GLULP6-201ENST00000399502 913 ntBASIC4.52□□□□□ -1.69
TM9SF4Q92544 RN7SKP199-201ENST00000410325 305 ntBASIC4.52□□□□□ -1.69
TM9SF4Q92544 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 TATDN1P1-201ENST00000414123 891 ntBASIC4.52□□□□□ -1.69
TM9SF4Q92544 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TM9SF4Q92544 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 AL358176.3-201ENST00000420757 454 ntBASIC4.52□□□□□ -1.69
TM9SF4Q92544 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.52□□□□□ -1.69
TM9SF4Q92544 AC241520.1-201ENST00000422654 1099 ntBASIC4.52□□□□□ -1.69
TM9SF4Q92544 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.52□□□□□ -1.69
TM9SF4Q92544 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 RPL7L1P1-201ENST00000448259 785 ntBASIC4.52□□□□□ -1.69
TM9SF4Q92544 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 RHEBP2-201ENST00000450289 600 ntBASIC4.52□□□□□ -1.69
TM9SF4Q92544 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 CYCSP34-201ENST00000458172 304 ntBASIC4.52□□□□□ -1.69
TM9SF4Q92544 RPL5P13-201ENST00000462840 709 ntBASIC4.52□□□□□ -1.69
TM9SF4Q92544 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 SNORA19.3-201ENST00000516165 130 ntBASIC4.52□□□□□ -1.69
TM9SF4Q92544 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 AC012339.2-201ENST00000523996 453 ntBASIC4.52□□□□□ -1.69
TM9SF4Q92544 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TM9SF4Q92544 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 TOMM20P2-201ENST00000540082 421 ntBASIC4.52□□□□□ -1.69
TM9SF4Q92544 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TM9SF4Q92544 AC009712.1-201ENST00000564938 316 ntBASIC4.52□□□□□ -1.69
TM9SF4Q92544 CYCSP40-201ENST00000575927 294 ntBASIC4.52□□□□□ -1.69
TM9SF4Q92544 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 AC008745.1-201ENST00000604064 271 ntBASIC4.52□□□□□ -1.69
TM9SF4Q92544 AL445435.1-201ENST00000604232 665 ntBASIC4.52□□□□□ -1.69
TM9SF4Q92544 AC140725.3-201ENST00000616193 880 ntBASIC4.52□□□□□ -1.69
TM9SF4Q92544 CYCSP41-201ENST00000616920 296 ntBASIC4.52□□□□□ -1.69
TM9SF4Q92544 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 OR6C71P-202ENST00000641886 1107 ntBASIC4.52□□□□□ -1.69
TM9SF4Q92544 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
TM9SF4Q92544 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
TM9SF4Q92544 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TM9SF4Q92544 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TM9SF4Q92544 Z95327.2-201ENST00000414579 1873 ntBASIC4.52□□□□□ -1.69
TM9SF4Q92544 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.52□□□□□ -1.69
TM9SF4Q92544 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TM9SF4Q92544 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
TM9SF4Q92544 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.51□□□□□ -1.69
TM9SF4Q92544 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TM9SF4Q92544 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TM9SF4Q92544 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.51□□□□□ -1.69
TM9SF4Q92544 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TM9SF4Q92544 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TM9SF4Q92544 ZNF29P-201ENST00000225587 168 ntBASIC4.51□□□□□ -1.69
TM9SF4Q92544 OR4K15-201ENST00000305051 1216 ntBASIC4.51□□□□□ -1.69
TM9SF4Q92544 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
TM9SF4Q92544 RNA5SP191-201ENST00000362585 102 ntBASIC4.51□□□□□ -1.69
TM9SF4Q92544 RNU6-207P-201ENST00000384137 107 ntBASIC4.51□□□□□ -1.69
TM9SF4Q92544 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.51□□□□□ -1.69
TM9SF4Q92544 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.51□□□□□ -1.69
TM9SF4Q92544 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
TM9SF4Q92544 CKS1BP6-201ENST00000424932 240 ntBASIC4.51□□□□□ -1.69
TM9SF4Q92544 HMGB3P5-201ENST00000428894 612 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms