Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RTN4IP1Q8WWV3 EIF1P3-201ENST00000423841 334 ntBASIC3.57□□□□□ -1.84
RTN4IP1Q8WWV3 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.57□□□□□ -1.84
RTN4IP1Q8WWV3 RPL23AP1-201ENST00000428990 471 ntBASIC3.57□□□□□ -1.84
RTN4IP1Q8WWV3 AC022022.1-201ENST00000430304 178 ntBASIC3.57□□□□□ -1.84
RTN4IP1Q8WWV3 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.57□□□□□ -1.84
RTN4IP1Q8WWV3 RPL23AP89-201ENST00000439324 255 ntBASIC3.57□□□□□ -1.84
RTN4IP1Q8WWV3 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.57□□□□□ -1.84
RTN4IP1Q8WWV3 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.57□□□□□ -1.84
RTN4IP1Q8WWV3 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.57□□□□□ -1.84
RTN4IP1Q8WWV3 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RTN4IP1Q8WWV3 AK3P4-201ENST00000504283 583 ntBASIC3.57□□□□□ -1.84
RTN4IP1Q8WWV3 RNU6-551P-201ENST00000516661 103 ntBASIC3.57□□□□□ -1.84
RTN4IP1Q8WWV3 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.57□□□□□ -1.84
RTN4IP1Q8WWV3 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.57□□□□□ -1.84
RTN4IP1Q8WWV3 OR5AN2P-201ENST00000534535 896 ntBASIC3.57□□□□□ -1.84
RTN4IP1Q8WWV3 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RTN4IP1Q8WWV3 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RTN4IP1Q8WWV3 AC020915.5-201ENST00000596836 964 ntBASIC3.57□□□□□ -1.84
RTN4IP1Q8WWV3 RPL12P25-202ENST00000598100 674 ntBASIC3.57□□□□□ -1.84
RTN4IP1Q8WWV3 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC3.57□□□□□ -1.84
RTN4IP1Q8WWV3 AC008536.1-201ENST00000602872 669 ntBASIC3.57□□□□□ -1.84
RTN4IP1Q8WWV3 AC079587.1-201ENST00000603846 277 ntBASIC3.57□□□□□ -1.84
RTN4IP1Q8WWV3 AC004948.1-201ENST00000609858 672 ntBASIC3.57□□□□□ -1.84
RTN4IP1Q8WWV3 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.57□□□□□ -1.84
RTN4IP1Q8WWV3 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.57□□□□□ -1.84
RTN4IP1Q8WWV3 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
RTN4IP1Q8WWV3 LINC02471-203ENST00000641941 4752 ntBASIC3.57□□□□□ -1.84
RTN4IP1Q8WWV3 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
RTN4IP1Q8WWV3 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
RTN4IP1Q8WWV3 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RTN4IP1Q8WWV3 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 AC073429.2-201ENST00000569694 1444 ntBASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 RNA5SP513-201ENST00000364648 118 ntBASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 MT-RNR1-201ENST00000389680 954 ntBASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 AC240504.1-201ENST00000395709 845 ntBASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 RPS4XP9-201ENST00000405151 780 ntBASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 AL356387.2-201ENST00000422272 243 ntBASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 AC011998.1-201ENST00000433403 117 ntBASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 AL035551.1-201ENST00000446931 348 ntBASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 SBDSP1-204ENST00000453858 737 ntBASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 DHFRP3-201ENST00000455595 559 ntBASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 MTND2P28-201ENST00000457540 1044 ntBASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 RPL7P22-201ENST00000466005 733 ntBASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 RPL35AP15-201ENST00000468042 339 ntBASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 RPL23AP2-201ENST00000471227 466 ntBASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 AC083829.1-201ENST00000503756 657 ntBASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 AC093720.1-201ENST00000505681 714 ntBASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 AC090281.1-201ENST00000523019 276 ntBASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 FAM106CP-201ENST00000582212 507 ntBASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 AC019193.2-201ENST00000610012 634 ntBASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 AL121873.1-201ENST00000616013 524 ntBASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 AC018555.1-201ENST00000567548 1980 ntBASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 ASNSP1-201ENST00000518311 1939 ntBASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
RTN4IP1Q8WWV3 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 OR5P1P-201ENST00000299512 925 ntBASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 AC093719.1-202ENST00000392735 373 ntBASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 MIR937-201ENST00000401271 86 ntBASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 TMSB10P2-201ENST00000416049 131 ntBASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 RFESDP1-201ENST00000422350 461 ntBASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 RPL12P28-201ENST00000430852 489 ntBASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 UBE2V2P3-201ENST00000433562 437 ntBASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 FHP1-201ENST00000442741 703 ntBASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 TXNP2-201ENST00000443918 295 ntBASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 NDUFA12P1-201ENST00000455914 406 ntBASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 AC105918.1-201ENST00000474399 838 ntBASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 AC037198.2-201ENST00000478845 733 ntBASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms