Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.12□□□□□ -1.59
SNED1Q8TER0 SETP10-201ENST00000424368 814 ntBASIC5.12□□□□□ -1.59
SNED1Q8TER0 AL691449.1-201ENST00000426570 421 ntBASIC5.12□□□□□ -1.59
SNED1Q8TER0 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.12□□□□□ -1.59
SNED1Q8TER0 PTMAP3-201ENST00000447474 330 ntBASIC5.12□□□□□ -1.59
SNED1Q8TER0 MTND6P5-201ENST00000448266 512 ntBASIC5.12□□□□□ -1.59
SNED1Q8TER0 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.12□□□□□ -1.59
SNED1Q8TER0 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.12□□□□□ -1.59
SNED1Q8TER0 RNU6-943P-201ENST00000516960 98 ntBASIC5.12□□□□□ -1.59
SNED1Q8TER0 MTND1P36-201ENST00000522384 936 ntBASIC5.12□□□□□ -1.59
SNED1Q8TER0 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.12□□□□□ -1.59
SNED1Q8TER0 GTF2IP22-201ENST00000554443 182 ntBASIC5.12□□□□□ -1.59
SNED1Q8TER0 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SNED1Q8TER0 MIR4472-2-201ENST00000582069 67 ntBASIC5.12□□□□□ -1.59
SNED1Q8TER0 AC092474.3-201ENST00000603022 568 ntBASIC5.12□□□□□ -1.59
SNED1Q8TER0 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.12□□□□□ -1.59
SNED1Q8TER0 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SNED1Q8TER0 AC091905.2-201ENST00000623143 306 ntBASIC5.12□□□□□ -1.59
SNED1Q8TER0 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.12□□□□□ -1.59
SNED1Q8TER0 AL356121.2-201ENST00000624715 780 ntBASIC5.12□□□□□ -1.59
SNED1Q8TER0 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.12□□□□□ -1.59
SNED1Q8TER0 HSPD1P14-201ENST00000432666 1618 ntBASIC5.12□□□□□ -1.59
SNED1Q8TER0 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SNED1Q8TER0 CASC19-284ENST00000642142 1868 ntBASIC5.12□□□□□ -1.59
SNED1Q8TER0 AP001284.1-201ENST00000528393 2118 ntBASIC5.12□□□□□ -1.59
SNED1Q8TER0 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.12□□□□□ -1.59
SNED1Q8TER0 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SNED1Q8TER0 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SNED1Q8TER0 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
SNED1Q8TER0 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
SNED1Q8TER0 AC016588.2-201ENST00000632484 3021 ntBASIC5.11□□□□□ -1.59
SNED1Q8TER0 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SNED1Q8TER0 MTCO1P7-201ENST00000419523 1542 ntBASIC5.11□□□□□ -1.59
SNED1Q8TER0 VPS35P1-201ENST00000563400 1518 ntBASIC5.11□□□□□ -1.59
SNED1Q8TER0 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SNED1Q8TER0 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SNED1Q8TER0 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.11□□□□□ -1.59
SNED1Q8TER0 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.11□□□□□ -1.59
SNED1Q8TER0 RNU2-22P-201ENST00000411266 212 ntBASIC5.11□□□□□ -1.59
SNED1Q8TER0 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.11□□□□□ -1.59
SNED1Q8TER0 AC244033.1-201ENST00000426826 870 ntBASIC5.11□□□□□ -1.59
SNED1Q8TER0 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.11□□□□□ -1.59
SNED1Q8TER0 AL050321.1-201ENST00000432363 400 ntBASIC5.11□□□□□ -1.59
SNED1Q8TER0 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.11□□□□□ -1.59
SNED1Q8TER0 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SNED1Q8TER0 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.11□□□□□ -1.59
SNED1Q8TER0 RPL7P22-201ENST00000466005 733 ntBASIC5.11□□□□□ -1.59
SNED1Q8TER0 AC090013.1-201ENST00000485147 480 ntBASIC5.11□□□□□ -1.59
SNED1Q8TER0 RN7SKP157-201ENST00000516174 282 ntBASIC5.11□□□□□ -1.59
SNED1Q8TER0 RNU6-467P-201ENST00000517027 110 ntBASIC5.11□□□□□ -1.59
SNED1Q8TER0 AC007991.1-201ENST00000522680 631 ntBASIC5.11□□□□□ -1.59
SNED1Q8TER0 AC087499.8-201ENST00000578406 226 ntBASIC5.11□□□□□ -1.59
SNED1Q8TER0 AC048344.4-201ENST00000619744 527 ntBASIC5.11□□□□□ -1.59
SNED1Q8TER0 AC022106.2-201ENST00000620114 757 ntBASIC5.11□□□□□ -1.59
SNED1Q8TER0 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SNED1Q8TER0 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.11□□□□□ -1.59
SNED1Q8TER0 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SNED1Q8TER0 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SNED1Q8TER0 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SNED1Q8TER0 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNED1Q8TER0 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SNED1Q8TER0 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNED1Q8TER0 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.1□□□□□ -1.59
SNED1Q8TER0 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNED1Q8TER0 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.1□□□□□ -1.59
SNED1Q8TER0 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SNED1Q8TER0 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SNED1Q8TER0 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.1□□□□□ -1.59
SNED1Q8TER0 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC5.1□□□□□ -1.59
SNED1Q8TER0 AC089999.1-201ENST00000460336 374 ntBASIC5.1□□□□□ -1.59
SNED1Q8TER0 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.1□□□□□ -1.59
SNED1Q8TER0 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.1□□□□□ -1.59
SNED1Q8TER0 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.1□□□□□ -1.59
SNED1Q8TER0 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.1□□□□□ -1.59
SNED1Q8TER0 AC112206.4-201ENST00000515142 405 ntBASIC5.1□□□□□ -1.59
SNED1Q8TER0 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNED1Q8TER0 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.1□□□□□ -1.59
SNED1Q8TER0 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.1□□□□□ -1.59
SNED1Q8TER0 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.1□□□□□ -1.59
SNED1Q8TER0 AC027455.1-201ENST00000574104 594 ntBASIC5.1□□□□□ -1.59
SNED1Q8TER0 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.1□□□□□ -1.59
SNED1Q8TER0 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.1□□□□□ -1.59
SNED1Q8TER0 AC068313.1-201ENST00000604028 1008 ntBASIC5.1□□□□□ -1.59
SNED1Q8TER0 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.1□□□□□ -1.59
SNED1Q8TER0 AL354798.1-201ENST00000622505 329 ntBASIC5.1□□□□□ -1.59
SNED1Q8TER0 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
SNED1Q8TER0 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SNED1Q8TER0 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SNED1Q8TER0 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.1□□□□□ -1.59
SNED1Q8TER0 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.1□□□□□ -1.59
SNED1Q8TER0 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNED1Q8TER0 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNED1Q8TER0 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
SNED1Q8TER0 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SNED1Q8TER0 AL513548.1-201ENST00000562904 1724 ntBASIC5.09□□□□□ -1.59
SNED1Q8TER0 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.09□□□□□ -1.59
SNED1Q8TER0 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.09□□□□□ -1.59
SNED1Q8TER0 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SNED1Q8TER0 OR6K3-202ENST00000368146 996 ntBASIC5.09□□□□□ -1.59
SNED1Q8TER0 AL445213.1-201ENST00000412589 747 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms