Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RN7SL362P-201ENST00000494228 267 ntBASIC5.65□□□□□ -1.5
NUP43Q8NFH3 HMGN1P12-201ENST00000499125 195 ntBASIC5.65□□□□□ -1.5
NUP43Q8NFH3 AC106822.1-201ENST00000502647 526 ntBASIC5.65□□□□□ -1.5
NUP43Q8NFH3 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.65□□□□□ -1.5
NUP43Q8NFH3 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.65□□□□□ -1.5
NUP43Q8NFH3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC5.65□□□□□ -1.5
NUP43Q8NFH3 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NUP43Q8NFH3 AC130365.2-201ENST00000525882 1201 ntBASIC5.65□□□□□ -1.5
NUP43Q8NFH3 OR5AP1P-201ENST00000529730 940 ntBASIC5.65□□□□□ -1.5
NUP43Q8NFH3 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.65□□□□□ -1.5
NUP43Q8NFH3 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NUP43Q8NFH3 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC5.65□□□□□ -1.5
NUP43Q8NFH3 AC123904.3-201ENST00000547218 814 ntBASIC5.65□□□□□ -1.5
NUP43Q8NFH3 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NUP43Q8NFH3 CYCSP2-201ENST00000558168 301 ntBASIC5.65□□□□□ -1.5
NUP43Q8NFH3 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC5.65□□□□□ -1.5
NUP43Q8NFH3 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.65□□□□□ -1.5
NUP43Q8NFH3 SMIM12P1-201ENST00000603004 274 ntBASIC5.65□□□□□ -1.5
NUP43Q8NFH3 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.65□□□□□ -1.5
NUP43Q8NFH3 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NUP43Q8NFH3 AC096861.1-201ENST00000616652 240 ntBASIC5.65□□□□□ -1.5
NUP43Q8NFH3 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC5.65□□□□□ -1.5
NUP43Q8NFH3 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
NUP43Q8NFH3 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
NUP43Q8NFH3 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.65□□□□□ -1.51
NUP43Q8NFH3 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
NUP43Q8NFH3 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
NUP43Q8NFH3 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
NUP43Q8NFH3 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
NUP43Q8NFH3 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
NUP43Q8NFH3 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
NUP43Q8NFH3 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
NUP43Q8NFH3 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
NUP43Q8NFH3 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
NUP43Q8NFH3 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
NUP43Q8NFH3 AL022578.1-201ENST00000439330 1433 ntBASIC5.65□□□□□ -1.51
NUP43Q8NFH3 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
NUP43Q8NFH3 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
NUP43Q8NFH3 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NUP43Q8NFH3 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.64□□□□□ -1.51
NUP43Q8NFH3 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NUP43Q8NFH3 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NUP43Q8NFH3 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NUP43Q8NFH3 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NUP43Q8NFH3 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
NUP43Q8NFH3 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
NUP43Q8NFH3 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC5.64□□□□□ -1.51
NUP43Q8NFH3 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NUP43Q8NFH3 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NUP43Q8NFH3 RNU1-134P-201ENST00000362935 165 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 Y_RNA.160-201ENST00000363677 92 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 Y_RNA.573-201ENST00000384763 105 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 RPS3AP3-201ENST00000411933 242 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 MYL6P5-201ENST00000412707 459 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.64□□□□□ -1.51
NUP43Q8NFH3 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NUP43Q8NFH3 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.64□□□□□ -1.51
NUP43Q8NFH3 AC245884.2-201ENST00000426257 404 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 AC073335.1-201ENST00000427776 363 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 AC092809.1-201ENST00000441469 474 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 MTND5P14-201ENST00000441481 1267 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.64□□□□□ -1.51
NUP43Q8NFH3 TIMM8BP2-201ENST00000445940 251 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 AC108463.1-201ENST00000450258 347 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 BX322784.1-201ENST00000455793 1077 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 RN7SL254P-201ENST00000460609 284 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 AC015724.1-201ENST00000478577 156 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 RPS29P25-201ENST00000481709 171 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 RPS3AP14-201ENST00000483907 780 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 AC083795.1-201ENST00000491760 320 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 RN7SL568P-201ENST00000493069 298 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 AC090638.1-201ENST00000498296 909 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 NDUFA5P12-201ENST00000503796 343 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 AC114981.1-201ENST00000503897 678 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.64□□□□□ -1.51
NUP43Q8NFH3 AC112484.3-201ENST00000505910 329 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 SAP18P1-201ENST00000512058 390 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 AC024589.1-201ENST00000512207 263 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC5.64□□□□□ -1.51
NUP43Q8NFH3 DEFB131D-201ENST00000526803 184 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.64□□□□□ -1.51
NUP43Q8NFH3 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.64□□□□□ -1.51
NUP43Q8NFH3 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.64□□□□□ -1.51
NUP43Q8NFH3 AL157687.1-201ENST00000554853 619 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 AL049779.3-201ENST00000557141 606 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.64□□□□□ -1.51
NUP43Q8NFH3 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.64□□□□□ -1.51
NUP43Q8NFH3 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NUP43Q8NFH3 MIR4701-201ENST00000583094 63 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.64□□□□□ -1.51
NUP43Q8NFH3 AC005261.5-201ENST00000596280 355 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 AC112191.3-201ENST00000604371 277 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 RNU6-84P-201ENST00000607737 102 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 uc_338.26-201ENST00000612659 160 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 MLECP1-201ENST00000615893 709 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NUP43Q8NFH3 AL512652.1-201ENST00000619006 500 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 AL591926.1-201ENST00000620542 217 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms