Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 AC011460.1-201ENST00000636268 1834 ntBASIC6.6□□□□□ -1.35
DEPDC4Q8N2C3 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 RN7SKP211-201ENST00000363328 315 ntBASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 RNU6-1207P-201ENST00000384343 107 ntBASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 U3.20-201ENST00000390909 217 ntBASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 RN7SKP235-201ENST00000410662 305 ntBASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 RPL17P17-201ENST00000419491 557 ntBASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 MTCYBP8-201ENST00000422855 651 ntBASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 COX6CP15-201ENST00000426313 211 ntBASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 ERLEC1P1-201ENST00000433806 578 ntBASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 ATP5LP4-201ENST00000434169 307 ntBASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 RPS20P5-201ENST00000434808 360 ntBASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 PSPC1P2-201ENST00000455130 225 ntBASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 snoU13.8-201ENST00000458890 104 ntBASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 RN7SL145P-201ENST00000469955 296 ntBASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 AC079594.1-201ENST00000489757 331 ntBASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 AC112191.2-201ENST00000522428 333 ntBASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 AC023827.2-201ENST00000566880 1061 ntBASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 AP005119.1-201ENST00000580956 292 ntBASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 RN7SL697P-201ENST00000582484 299 ntBASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 PSMA6P4-201ENST00000603247 718 ntBASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 AC087763.1-201ENST00000603391 286 ntBASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 AL022238.3-201ENST00000609279 443 ntBASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 AC000123.2-201ENST00000623124 461 ntBASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 AC079597.1-201ENST00000624306 508 ntBASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 MTND5P28-201ENST00000438005 1594 ntBASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 MTND5P3-201ENST00000438536 1800 ntBASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.59□□□□□ -1.35
DEPDC4Q8N2C3 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.59□□□□□ -1.36
DEPDC4Q8N2C3 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 AL355377.1-201ENST00000621125 1653 ntBASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 AP002800.1-201ENST00000624982 2225 ntBASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 FOLH1B-202ENST00000529567 2145 ntBASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 AL139384.2-201ENST00000613809 3590 ntBASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 RPL10P16-201ENST00000325000 645 ntBASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 RNA5SP258-201ENST00000362750 119 ntBASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 Y_RNA.234-201ENST00000364409 97 ntBASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 SNORA4.3-201ENST00000365564 137 ntBASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 MIR514A2-201ENST00000385131 88 ntBASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 MIR514A3-201ENST00000385132 88 ntBASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 AL360271.1-201ENST00000395679 510 ntBASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 RPL7-203ENST00000396466 762 ntTSL 3 BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 RPL12P10-201ENST00000413498 498 ntBASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 AC092832.1-201ENST00000422934 400 ntBASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 CHIAP3-201ENST00000423668 1133 ntBASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 PPIL1P1-201ENST00000423936 499 ntBASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 AC234779.1-201ENST00000425910 285 ntBASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 AC104698.1-201ENST00000435671 276 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms