Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC2.77□□□□□ -1.97
CSMD3Q7Z407 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
CSMD3Q7Z407 AC108206.1-201ENST00000570186 4159 ntBASIC2.77□□□□□ -1.97
CSMD3Q7Z407 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC2.77□□□□□ -1.97
CSMD3Q7Z407 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CSMD3Q7Z407 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CSMD3Q7Z407 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CSMD3Q7Z407 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC2.77□□□□□ -1.97
CSMD3Q7Z407 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.77□□□□□ -1.97
CSMD3Q7Z407 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC2.77□□□□□ -1.97
CSMD3Q7Z407 RN7SKP57-201ENST00000517248 293 ntBASIC2.77□□□□□ -1.97
CSMD3Q7Z407 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC2.77□□□□□ -1.97
CSMD3Q7Z407 AC007458.1-201ENST00000542812 373 ntBASIC2.77□□□□□ -1.97
CSMD3Q7Z407 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC2.77□□□□□ -1.97
CSMD3Q7Z407 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.77□□□□□ -1.97
CSMD3Q7Z407 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC2.77□□□□□ -1.97
CSMD3Q7Z407 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CSMD3Q7Z407 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
CSMD3Q7Z407 AL513548.1-201ENST00000562904 1724 ntBASIC2.77□□□□□ -1.97
CSMD3Q7Z407 AC005831.1-201ENST00000624384 1697 ntBASIC2.77□□□□□ -1.97
CSMD3Q7Z407 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
CSMD3Q7Z407 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
CSMD3Q7Z407 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
CSMD3Q7Z407 SOD2P1-201ENST00000396543 562 ntBASIC2.77□□□□□ -1.97
CSMD3Q7Z407 ATP5A1P2-201ENST00000412323 255 ntBASIC2.77□□□□□ -1.97
CSMD3Q7Z407 RPL36AP13-201ENST00000457490 317 ntBASIC2.77□□□□□ -1.97
CSMD3Q7Z407 RPL23AP12-201ENST00000467573 473 ntBASIC2.77□□□□□ -1.97
CSMD3Q7Z407 AL136126.1-201ENST00000473603 402 ntBASIC2.77□□□□□ -1.97
CSMD3Q7Z407 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.77□□□□□ -1.97
CSMD3Q7Z407 QTRT1P1-201ENST00000604344 1078 ntBASIC2.77□□□□□ -1.97
CSMD3Q7Z407 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
CSMD3Q7Z407 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC2.76□□□□□ -1.97
CSMD3Q7Z407 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC2.76□□□□□ -1.97
CSMD3Q7Z407 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
CSMD3Q7Z407 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC2.76□□□□□ -1.97
CSMD3Q7Z407 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CSMD3Q7Z407 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC2.76□□□□□ -1.97
CSMD3Q7Z407 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
CSMD3Q7Z407 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CSMD3Q7Z407 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CSMD3Q7Z407 RNU6-301P-201ENST00000384277 107 ntBASIC2.76□□□□□ -1.97
CSMD3Q7Z407 TRAPPC2P2-201ENST00000517589 409 ntBASIC2.76□□□□□ -1.97
CSMD3Q7Z407 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.76□□□□□ -1.97
CSMD3Q7Z407 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC2.76□□□□□ -1.97
CSMD3Q7Z407 AC091167.4-201ENST00000605079 184 ntBASIC2.76□□□□□ -1.97
CSMD3Q7Z407 AL033523.1-201ENST00000605153 153 ntBASIC2.76□□□□□ -1.97
CSMD3Q7Z407 AC013412.1-201ENST00000610687 192 ntBASIC2.76□□□□□ -1.97
CSMD3Q7Z407 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
CSMD3Q7Z407 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CSMD3Q7Z407 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC2.76□□□□□ -1.97
CSMD3Q7Z407 AC023632.6-201ENST00000624338 2177 ntBASIC2.76□□□□□ -1.97
CSMD3Q7Z407 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CSMD3Q7Z407 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CSMD3Q7Z407 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC2.76□□□□□ -1.97
CSMD3Q7Z407 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC2.76□□□□□ -1.97
CSMD3Q7Z407 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC2.76□□□□□ -1.97
CSMD3Q7Z407 RPL23AP65-201ENST00000475608 468 ntBASIC2.76□□□□□ -1.97
CSMD3Q7Z407 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.76□□□□□ -1.97
CSMD3Q7Z407 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
CSMD3Q7Z407 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
CSMD3Q7Z407 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CSMD3Q7Z407 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
CSMD3Q7Z407 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CSMD3Q7Z407 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC2.76□□□□□ -1.97
CSMD3Q7Z407 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC2.76□□□□□ -1.97
CSMD3Q7Z407 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
CSMD3Q7Z407 NACA3P-201ENST00000359690 648 ntBASIC2.76□□□□□ -1.97
CSMD3Q7Z407 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
CSMD3Q7Z407 RNU11-201ENST00000387069 134 ntBASIC2.76□□□□□ -1.97
CSMD3Q7Z407 AL158156.1-201ENST00000422509 473 ntBASIC2.76□□□□□ -1.97
CSMD3Q7Z407 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.76□□□□□ -1.97
CSMD3Q7Z407 RPL23AP46-201ENST00000438548 490 ntBASIC2.76□□□□□ -1.97
CSMD3Q7Z407 AC027216.1-201ENST00000577726 685 ntBASIC2.76□□□□□ -1.97
CSMD3Q7Z407 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC2.76□□□□□ -1.97
CSMD3Q7Z407 MIR3922-201ENST00000585192 84 ntBASIC2.76□□□□□ -1.97
CSMD3Q7Z407 AL360012.1-201ENST00000602813 131 ntBASIC2.76□□□□□ -1.97
CSMD3Q7Z407 AL137849.1-201ENST00000604767 169 ntBASIC2.76□□□□□ -1.97
CSMD3Q7Z407 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CSMD3Q7Z407 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CSMD3Q7Z407 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
CSMD3Q7Z407 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
CSMD3Q7Z407 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CSMD3Q7Z407 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CSMD3Q7Z407 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC2.75□□□□□ -1.97
CSMD3Q7Z407 NMNAT1P2-201ENST00000435192 860 ntBASIC2.75□□□□□ -1.97
CSMD3Q7Z407 RPS17P13-201ENST00000448974 407 ntBASIC2.75□□□□□ -1.97
CSMD3Q7Z407 AC090013.1-201ENST00000485147 480 ntBASIC2.75□□□□□ -1.97
CSMD3Q7Z407 DEFB109D-201ENST00000529497 240 ntBASIC2.75□□□□□ -1.97
CSMD3Q7Z407 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC2.75□□□□□ -1.97
CSMD3Q7Z407 AC243312.2-201ENST00000623340 601 ntBASIC2.75□□□□□ -1.97
CSMD3Q7Z407 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC2.75□□□□□ -1.97
CSMD3Q7Z407 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CSMD3Q7Z407 AL022393.1-201ENST00000625142 1677 ntBASIC2.75□□□□□ -1.97
CSMD3Q7Z407 MTCO1P12-201ENST00000414273 1543 ntBASIC2.75□□□□□ -1.97
CSMD3Q7Z407 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC2.75□□□□□ -1.97
CSMD3Q7Z407 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CSMD3Q7Z407 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CSMD3Q7Z407 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CSMD3Q7Z407 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CSMD3Q7Z407 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms