Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 SOX5P1-201ENST00000524155 1127 ntBASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 AL442163.2-201ENST00000553912 710 ntBASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 AL049839.1-201ENST00000556151 657 ntBASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 MIR4458-201ENST00000578872 75 ntBASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 ABI1P1-201ENST00000603375 1120 ntBASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 AC010857.1-201ENST00000606398 594 ntBASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 AC133644.2-201ENST00000608142 540 ntBASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 SNORD91B-202ENST00000608459 222 ntBASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 AP005229.2-201ENST00000609980 697 ntBASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 AC091905.4-201ENST00000623432 202 ntBASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 AC106730.3-201ENST00000624568 641 ntBASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
NHLRC1Q6VVB1 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 AC009951.1-201ENST00000623674 2614 ntBASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 MAPK10-320ENST00000641462 6696 ntBASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 XPOTP1-201ENST00000443317 2398 ntBASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 AC073429.2-201ENST00000569694 1444 ntBASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 AL512646.1-201ENST00000269395 1077 ntBASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 RNA5SP507-201ENST00000363603 121 ntBASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 OR51B3P-201ENST00000412287 913 ntBASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 VN1R37P-201ENST00000419096 748 ntBASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 OR2AM1P-201ENST00000422137 422 ntBASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 AC241520.1-201ENST00000422654 1099 ntBASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 RBMY2QP-201ENST00000429799 1147 ntBASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 FABP7P2-201ENST00000429946 379 ntBASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 CEACAMP1-201ENST00000434624 1035 ntBASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 AC092447.2-201ENST00000435487 669 ntBASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 AC009263.1-201ENST00000441193 1239 ntBASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 AL096803.2-201ENST00000450032 677 ntBASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 AC005351.1-201ENST00000511152 786 ntBASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 BTF3P13-201ENST00000513224 490 ntBASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 RNU6-709P-201ENST00000517257 104 ntBASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 HMGB1P23-201ENST00000518743 568 ntBASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 MTND1P36-201ENST00000522384 936 ntBASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 VN1R88P-201ENST00000596787 292 ntBASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 AC005776.1-201ENST00000603164 290 ntBASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 BNIP3P19-201ENST00000605397 577 ntBASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 AL121932.1-201ENST00000605542 214 ntBASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 EIF3FP1-201ENST00000613970 806 ntBASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 AC018926.3-201ENST00000618841 406 ntBASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 AC068870.2-201ENST00000620635 389 ntBASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 AP000843.1-201ENST00000624880 701 ntBASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 ASNSP1-204ENST00000641977 1664 ntBASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NHLRC1Q6VVB1 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.31□□□□□ -1.72
NHLRC1Q6VVB1 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NHLRC1Q6VVB1 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NHLRC1Q6VVB1 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NHLRC1Q6VVB1 AC099654.2-201ENST00000433031 1980 ntBASIC4.31□□□□□ -1.72
NHLRC1Q6VVB1 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
NHLRC1Q6VVB1 AC074029.4-201ENST00000624796 1859 ntBASIC4.31□□□□□ -1.72
NHLRC1Q6VVB1 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NHLRC1Q6VVB1 DDX18P5-201ENST00000534547 1306 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms