Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 RNU6-251P-201ENST00000363235 104 ntBASIC5.19□□□□□ -1.58
RNF220Q5VTB9 RNA5SP391-201ENST00000363456 119 ntBASIC5.19□□□□□ -1.58
RNF220Q5VTB9 RN7SKP275-201ENST00000364626 301 ntBASIC5.19□□□□□ -1.58
RNF220Q5VTB9 RNU6-621P-201ENST00000364752 109 ntBASIC5.19□□□□□ -1.58
RNF220Q5VTB9 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 FABP12P1-201ENST00000401911 322 ntBASIC5.19□□□□□ -1.58
RNF220Q5VTB9 AL078604.1-201ENST00000404609 466 ntBASIC5.19□□□□□ -1.58
RNF220Q5VTB9 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 AC092634.6-201ENST00000418558 192 ntBASIC5.19□□□□□ -1.58
RNF220Q5VTB9 PTP4A1P5-201ENST00000420305 455 ntBASIC5.19□□□□□ -1.58
RNF220Q5VTB9 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.19□□□□□ -1.58
RNF220Q5VTB9 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 RPL19P16-201ENST00000433839 588 ntBASIC5.19□□□□□ -1.58
RNF220Q5VTB9 AL354941.1-201ENST00000438600 464 ntBASIC5.19□□□□□ -1.58
RNF220Q5VTB9 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 RPL12P26-201ENST00000452430 487 ntBASIC5.19□□□□□ -1.58
RNF220Q5VTB9 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 ACA64.1-201ENST00000459171 127 ntBASIC5.19□□□□□ -1.58
RNF220Q5VTB9 AC010683.1-201ENST00000473673 378 ntBASIC5.19□□□□□ -1.58
RNF220Q5VTB9 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.19□□□□□ -1.58
RNF220Q5VTB9 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 AC027309.2-201ENST00000520566 192 ntBASIC5.19□□□□□ -1.58
RNF220Q5VTB9 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 AC008015.1-201ENST00000555505 465 ntBASIC5.19□□□□□ -1.58
RNF220Q5VTB9 TRAV15-201ENST00000556680 249 ntBASIC5.19□□□□□ -1.58
RNF220Q5VTB9 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 EIF5A2P1-201ENST00000564027 460 ntBASIC5.19□□□□□ -1.58
RNF220Q5VTB9 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 AC009237.13-201ENST00000603193 276 ntBASIC5.19□□□□□ -1.58
RNF220Q5VTB9 AC108738.1-201ENST00000603703 237 ntBASIC5.19□□□□□ -1.58
RNF220Q5VTB9 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 LINC01963-201ENST00000562038 3148 ntBASIC5.19□□□□□ -1.58
RNF220Q5VTB9 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 SOCS5P3-201ENST00000425115 1576 ntBASIC5.19□□□□□ -1.58
RNF220Q5VTB9 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.19□□□□□ -1.58
RNF220Q5VTB9 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF220Q5VTB9 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF220Q5VTB9 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.18□□□□□ -1.58
RNF220Q5VTB9 AC120338.1-201ENST00000625074 1541 ntBASIC5.18□□□□□ -1.58
RNF220Q5VTB9 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF220Q5VTB9 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
RNF220Q5VTB9 AC012321.1-201ENST00000561622 1588 ntBASIC5.18□□□□□ -1.58
RNF220Q5VTB9 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RNF220Q5VTB9 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.18□□□□□ -1.58
RNF220Q5VTB9 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.18□□□□□ -1.58
RNF220Q5VTB9 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.18□□□□□ -1.58
RNF220Q5VTB9 SNORA64.1-201ENST00000362600 132 ntBASIC5.18□□□□□ -1.58
RNF220Q5VTB9 RN7SKP187-201ENST00000365536 330 ntBASIC5.18□□□□□ -1.58
RNF220Q5VTB9 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RNF220Q5VTB9 SNORD116-2-201ENST00000384274 95 ntBASIC5.18□□□□□ -1.58
RNF220Q5VTB9 SNORD116-6-201ENST00000384711 96 ntBASIC5.18□□□□□ -1.58
RNF220Q5VTB9 ATP5F1P3-201ENST00000397213 657 ntBASIC5.18□□□□□ -1.58
RNF220Q5VTB9 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RNF220Q5VTB9 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.18□□□□□ -1.58
RNF220Q5VTB9 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.18□□□□□ -1.58
RNF220Q5VTB9 RIMKLBP2-201ENST00000424737 654 ntBASIC5.18□□□□□ -1.58
RNF220Q5VTB9 AL158073.1-201ENST00000426848 1104 ntBASIC5.18□□□□□ -1.58
RNF220Q5VTB9 BX323845.3-201ENST00000428215 527 ntBASIC5.18□□□□□ -1.58
RNF220Q5VTB9 AL365396.1-201ENST00000430854 671 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 145.3 ms