Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.01□□□□□ -1.77
RFX4Q33E94 AC116447.1-201ENST00000613153 453 ntBASIC4.01□□□□□ -1.77
RFX4Q33E94 AL445528.2-201ENST00000620582 470 ntBASIC4.01□□□□□ -1.77
RFX4Q33E94 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.01□□□□□ -1.77
RFX4Q33E94 OR2L1P-202ENST00000641567 1023 ntBASIC4.01□□□□□ -1.77
RFX4Q33E94 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RFX4Q33E94 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.01□□□□□ -1.77
RFX4Q33E94 AC010928.1-201ENST00000592477 1447 ntBASIC4.01□□□□□ -1.77
RFX4Q33E94 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
RFX4Q33E94 AL356489.2-201ENST00000566968 3528 ntBASIC4.01□□□□□ -1.77
RFX4Q33E94 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
RFX4Q33E94 AL133412.1-201ENST00000380194 2992 ntBASIC4.01□□□□□ -1.77
RFX4Q33E94 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RFX4Q33E94 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
RFX4Q33E94 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4□□□□□ -1.77
RFX4Q33E94 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
RFX4Q33E94 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RFX4Q33E94 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
RFX4Q33E94 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RFX4Q33E94 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
RFX4Q33E94 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RFX4Q33E94 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4□□□□□ -1.77
RFX4Q33E94 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4□□□□□ -1.77
RFX4Q33E94 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4□□□□□ -1.77
RFX4Q33E94 GLULP6-201ENST00000399502 913 ntBASIC4□□□□□ -1.77
RFX4Q33E94 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
RFX4Q33E94 RNU6-603P-201ENST00000411403 107 ntBASIC4□□□□□ -1.77
RFX4Q33E94 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4□□□□□ -1.77
RFX4Q33E94 RPL6P29-201ENST00000414863 865 ntBASIC4□□□□□ -1.77
RFX4Q33E94 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4□□□□□ -1.77
RFX4Q33E94 RPS26P13-201ENST00000419030 330 ntBASIC4□□□□□ -1.77
RFX4Q33E94 DNAJA1P1-201ENST00000425106 1187 ntBASIC4□□□□□ -1.77
RFX4Q33E94 NPM1P26-201ENST00000426339 738 ntBASIC4□□□□□ -1.77
RFX4Q33E94 AP001324.1-201ENST00000428553 399 ntBASIC4□□□□□ -1.77
RFX4Q33E94 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4□□□□□ -1.77
RFX4Q33E94 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4□□□□□ -1.77
RFX4Q33E94 EIF4A2P2-201ENST00000455776 1070 ntBASIC4□□□□□ -1.77
RFX4Q33E94 HNRNPDLP3-201ENST00000456745 380 ntBASIC4□□□□□ -1.77
RFX4Q33E94 AL133477.1-201ENST00000457472 514 ntBASIC4□□□□□ -1.77
RFX4Q33E94 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4□□□□□ -1.77
RFX4Q33E94 RPS27AP17-201ENST00000463344 455 ntBASIC4□□□□□ -1.77
RFX4Q33E94 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4□□□□□ -1.77
RFX4Q33E94 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4□□□□□ -1.77
RFX4Q33E94 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4□□□□□ -1.77
RFX4Q33E94 OR5M2P-201ENST00000529003 936 ntBASIC4□□□□□ -1.77
RFX4Q33E94 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4□□□□□ -1.77
RFX4Q33E94 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4□□□□□ -1.77
RFX4Q33E94 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4□□□□□ -1.77
RFX4Q33E94 EIF4A2P1-201ENST00000587313 1063 ntBASIC4□□□□□ -1.77
RFX4Q33E94 AC017076.1-201ENST00000607613 578 ntBASIC4□□□□□ -1.77
RFX4Q33E94 AC016911.1-201ENST00000613297 452 ntBASIC4□□□□□ -1.77
RFX4Q33E94 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4□□□□□ -1.77
RFX4Q33E94 AC067852.7-201ENST00000623270 535 ntBASIC4□□□□□ -1.77
RFX4Q33E94 AP006248.2-201ENST00000623309 592 ntBASIC4□□□□□ -1.77
RFX4Q33E94 AC006065.6-201ENST00000625201 545 ntBASIC4□□□□□ -1.77
RFX4Q33E94 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4□□□□□ -1.77
RFX4Q33E94 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
RFX4Q33E94 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
RFX4Q33E94 AC083899.2-201ENST00000423285 1376 ntBASIC4□□□□□ -1.77
RFX4Q33E94 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4□□□□□ -1.77
RFX4Q33E94 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
RFX4Q33E94 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
RFX4Q33E94 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
RFX4Q33E94 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RFX4Q33E94 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RFX4Q33E94 ZNF962P-201ENST00000443465 3140 ntBASIC3.99□□□□□ -1.77
RFX4Q33E94 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
RFX4Q33E94 AL049555.1-201ENST00000562834 1933 ntBASIC3.99□□□□□ -1.77
RFX4Q33E94 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RFX4Q33E94 OR11H5P-202ENST00000641612 1325 ntBASIC3.99□□□□□ -1.77
RFX4Q33E94 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.99□□□□□ -1.77
RFX4Q33E94 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
RFX4Q33E94 FAM3C2-201ENST00000312214 681 ntBASIC3.99□□□□□ -1.77
RFX4Q33E94 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RFX4Q33E94 RNA5SP332-201ENST00000391063 115 ntBASIC3.99□□□□□ -1.77
RFX4Q33E94 RNA5SP397-201ENST00000391323 118 ntBASIC3.99□□□□□ -1.77
RFX4Q33E94 MIR298-201ENST00000401212 88 ntBASIC3.99□□□□□ -1.77
RFX4Q33E94 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
RFX4Q33E94 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RFX4Q33E94 EIF1P3-201ENST00000423841 334 ntBASIC3.99□□□□□ -1.77
RFX4Q33E94 RPL12P34-201ENST00000424532 479 ntBASIC3.99□□□□□ -1.77
RFX4Q33E94 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.99□□□□□ -1.77
RFX4Q33E94 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.99□□□□□ -1.77
RFX4Q33E94 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.99□□□□□ -1.77
RFX4Q33E94 NDUFA5P1-201ENST00000433858 341 ntBASIC3.99□□□□□ -1.77
RFX4Q33E94 AC008072.1-201ENST00000434254 824 ntBASIC3.99□□□□□ -1.77
RFX4Q33E94 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.99□□□□□ -1.77
RFX4Q33E94 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.99□□□□□ -1.77
RFX4Q33E94 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.99□□□□□ -1.77
RFX4Q33E94 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.99□□□□□ -1.77
RFX4Q33E94 NDUFS5P3-201ENST00000450668 321 ntBASIC3.99□□□□□ -1.77
RFX4Q33E94 AL354710.1-201ENST00000453641 246 ntBASIC3.99□□□□□ -1.77
RFX4Q33E94 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.99□□□□□ -1.77
RFX4Q33E94 AC109458.1-201ENST00000508858 316 ntBASIC3.99□□□□□ -1.77
RFX4Q33E94 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.99□□□□□ -1.77
RFX4Q33E94 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC3.99□□□□□ -1.77
RFX4Q33E94 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.99□□□□□ -1.77
RFX4Q33E94 AC117525.1-201ENST00000515228 503 ntBASIC3.99□□□□□ -1.77
RFX4Q33E94 RNU6-319P-201ENST00000516025 108 ntBASIC3.99□□□□□ -1.77
RFX4Q33E94 SNORA48.9-201ENST00000516419 162 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms